| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0891 |
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| Symbol | |
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| ID | 5192086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1012535 |
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| End bp | 1014826 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585350 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001266237 |
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| Protein GI | 148546135 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.31218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGT ACGTACCATC TGCTGTGAGT TCGCCACGCC TGATCGTGTC TGCCATCGGT
GTCGCCCTGA GTGCCTCGTC GGCCTATGCC GCCGATCCGG CCGCCAGCAG CGCCATCACC
CTCGATGCCA CCAGCGTCAA CGGCAAGGCT GAACAAGCCA GCACCGATTA CAAGGTGGAC
AAGGCCGCCT CGCAGAAGTA CACCGCGCCG CTGGTAGACA CCCCGCGCTC GATAACCGTG
ATCCCGCAGC AAGTGATCAA GGACACCAAC GCCCTGACCC TGCAGGATGC CCTGCGCACC
GTACCCGGCA TTACCTTCGG TGCCGGCGAA GGTGGCAACC CGCAAGGCGA CCGCCCGTTC
ATTCGTGGCT TCGACGCCCA GGGCGATACC TACCTGGACG GCGTACGTGA CACTGGCGCC
CAAACCCGCG AAATCTTCGC CATCGAATCT GTTGAAGTGG CCAAGGGGCC GAACTCGGCC
ATCGGTGGCC GCGGCGCGGC CGGCGGTACC ATCAACCTGG TAAGCAAGCG CGCGCATCTG
GGCAACTCGC TGGACGGCGC CTGGACCTGG GGCAGCGACC AGACCCAGCG CTACACCTTC
GATGGCAACT ACCAGTTCAG CGATACCGTT GCCGGTCGCC TGAACCTGAT GACCCACGAA
AGCAACGTCG CCGGCCGCGA CAAGGTCAAC TACGACCGCT GGGGTATCGC CCCGTCGCTG
GCCTTTGGCC TGGGCACGCC GACCCGCGTC AACCTTGACT ACTACCACCT GGAAAGTGAC
GACCTGCCGG ATTCGGGTAT CCCTTACACC ATCCCGACCA ACGGCAGCGC CGGGCGCACC
TCGGCACACC CGAGCAAGCC GAATGATGGC GGCGACAGTG ACAACTTCTA TGGCCTGACC
GGCCGCGACT TCCGCAAGAC CCGAGTGGAT ATCGCAACCT TCGCCGTCGA GCACGACCTG
ACCGACTCGC TGACCATCAA GAACACCCTG CGTCACGGCA ACAGCATGCA GGACTACATC
CTGACCCAGC CCGACGACAG CAAGGGCAAC GTCAACAACG GCAGTGTCTG GCGCCGCGCC
AACACCCGTG TCGGCAACAC CGCCACTACC ACCAACCAGA CCGATCTGTT CGGCGAGTTC
TACGTTGGCG GCATGAAAAA CAGCTTCTCG ACCGGTATCG AACTGAGCCG TGAAGAAAGC
GAGCGCTCAA GCTACACCGT CGACACCGAC ACCGTGCCAG GCGGGTCTGC CAACAGCAAC
TGCACCCCAG GCATGATCGG CGCCACCAGT GGCTATAACT GCACTTCGCT GAGCAACCCG
AACCCGGATG ATCCGTGGAA CGGCGCCATC TCGCGCAACT ATGCCGGCAC CACCACCAAC
AGCAAGACCC GTGCAATCTA CGTGTTCGAC ACCCTGGAGC TTACCCCGGA GTGGCTGGTC
AACATGGGCC TGCGCTACGA CCACTTTGAC ACCGACTACA AGACCTACAA CGCCGCTGGC
ACCACCACCG CCAAAGGCAA AGATGTCAGC GAGTTCGTCA CCGGCCAGCT GGGCCTGGTG
TGGAAGCCGG CCGAAAACGG CAGCATCTAC GTGTCCTATG CCACCTCCGC CACACCACCT
GGCGCCATGC TTGGCGAAGG TACCGAAGGC AACCCGCTGG GCGGCACGCC AGACCGTAAC
GGCAACCTGC TGGGCAGCGA CATGGAGCCG GAAGAAACCA CCAACTACGA GATCGGTACC
AAGTGGGACC TGCTTGACCA GCGTCTGTCG CTGGCTGCCG CGCTGTTCCG CACCGAGAAG
GAAAACGCCC GGGTCCAGGT CAACACCAAT ACCTACGAGA ACATTGGCGA GACCCGGGTT
CAAGGTATCG AACTGTCGGC CAGCGGCAAG CTGACCGACA AGTGGCAGGT GTTCGCCGGC
TACACCTACA TGCAGGCTCG CCAGATCGAC GGCGGCCCGG TGGGCAAGGC CAACGACGGC
AACCAGCTGC CGAACACGCC AAACAACAGC GCCAGCCTGT GGACCACCTA CTCGATCACA
CCAAAGCTGA CCGTTGGCGG TGGTGCGTTC TACGTGGATG ACGTGTACGG CAGCGTGGCC
AACACCACCA TGGTCGACAG CTACGTACGC TACGACGCCA TGGCCGCCTA CAAGCTGACC
AAGAACGTCG ACCTGCAACT GAACGTGCAG AACCTGACCA ACGAGGTGTA CTACGACAAG
GCCTTCTCCA CCCACTTCGC CAACCAGGCG GCTGGGCGGA CGGCACTGCT GACCACCAGC
GTCCACTTCT GA
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| Protein sequence | MRQYVPSAVS SPRLIVSAIG VALSASSAYA ADPAASSAIT LDATSVNGKA EQASTDYKVD
KAASQKYTAP LVDTPRSITV IPQQVIKDTN ALTLQDALRT VPGITFGAGE GGNPQGDRPF
IRGFDAQGDT YLDGVRDTGA QTREIFAIES VEVAKGPNSA IGGRGAAGGT INLVSKRAHL
GNSLDGAWTW GSDQTQRYTF DGNYQFSDTV AGRLNLMTHE SNVAGRDKVN YDRWGIAPSL
AFGLGTPTRV NLDYYHLESD DLPDSGIPYT IPTNGSAGRT SAHPSKPNDG GDSDNFYGLT
GRDFRKTRVD IATFAVEHDL TDSLTIKNTL RHGNSMQDYI LTQPDDSKGN VNNGSVWRRA
NTRVGNTATT TNQTDLFGEF YVGGMKNSFS TGIELSREES ERSSYTVDTD TVPGGSANSN
CTPGMIGATS GYNCTSLSNP NPDDPWNGAI SRNYAGTTTN SKTRAIYVFD TLELTPEWLV
NMGLRYDHFD TDYKTYNAAG TTTAKGKDVS EFVTGQLGLV WKPAENGSIY VSYATSATPP
GAMLGEGTEG NPLGGTPDRN GNLLGSDMEP EETTNYEIGT KWDLLDQRLS LAAALFRTEK
ENARVQVNTN TYENIGETRV QGIELSASGK LTDKWQVFAG YTYMQARQID GGPVGKANDG
NQLPNTPNNS ASLWTTYSIT PKLTVGGGAF YVDDVYGSVA NTTMVDSYVR YDAMAAYKLT
KNVDLQLNVQ NLTNEVYYDK AFSTHFANQA AGRTALLTTS VHF
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