| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0890 |
|---|
| Symbol | |
|---|
| ID | 5195518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1009729 |
|---|
| End bp | 1012281 |
|---|
| Gene Length | 2553 bp |
|---|
| Protein Length | 850 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640585349 |
|---|
| Product | flavodoxin/nitric oxide synthase |
|---|
| Protein accession | YP_001266236 |
|---|
| Protein GI | 148546134 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
[COG3182] Uncharacterized iron-regulated membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.208883 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.710482 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGAAGA AGACGCTGTT CCAATTGCAC TGGTTCTTTG GCATCACCGC TGGCCTGGTG
CTGGCCTTGA TGGGCATTAC CGGGGCGCTG TACTCGTTCC AGGAAGAACT GCTGCGCGCA
TTCAATGCCG ATGTACTCAA GGTAGAAGTA CGCGCCGAAG GCGTGCTACC GCCGGCCGAG
CTGGTTAAGC GGGTCGAAGC CCAGCAACAC GACAAAGTCT CGATGCTGTG GGTCGACGTG
CGCGAAGGCA ACGCTGCACG GATCTTCTTC ATGCCCGCAC CGGGCGAACG CCGTGGCGAG
CTGCGCTATG CCGACCCGTA CACCGGCGAA CTCAAGGGCG AAGCGGCCGG GCAAGGCTTC
TTCAACCTCA TGCTCAAGCT GCACCGTTTC CTCGCCATGG GCGATACTGG CCGGCAAATC
ACCGGGGCCT GCACCCTGAT GCTGGTGTTC TTCTGCCTGT CCGGCCTTTA CCTGCGCTGG
CCGCGTAAAG CGCTGGACTG GCGCACCTGG CTGACCTTCG ACTGGGCCAA GAAAGGCCGC
GCCTTCAACT GGGACCTGCA CGCCGTTGCC GGCACCTGGT GCCTGCTGTT CTATCTTCTG
TTCGCCCTGA CCGGGCTGTT CTGGTCCTAT GAATGGTACC GTGAAGGCCT GAACAAGCTG
CTGGCCGACG CGCCGGCCGC GGGCCAGCAG CAAAAACGTG GTGAAGGCCG TGGCCGGCAC
GGGCCGCAAA AAGTCGACAA GAATGCGCCA CCGCTGGTGG TGGACTACGA CGCCATCTGG
GCCAACCTCC AGGAGGCCGC AGGCCCAGGC CTGTCCACCT ACAACCTGCG CCTGCCGCCT
GCTGGCGGTC AGCCGGCCAA CCTGTTCTAC CTGCTCGACA ACGCGGCGCA CCCACGTGCC
TTCAATACCC TGGTCCTTGA CCCGGCCACC GGCCAAGTTA AGAAGCACGA TCGCTACACC
GACAAGTCAT TCAAGGCGCA GTTGCTGCAG AGTGTTTACG CCTTGCACGT CGGCGAATAC
TTCGGCTTGC CCGGGCGCAT CATCGTCACC ATCGCCAGCC TCACCATGCC GTTGTTCTTC
GTCACCGGCT GGCTGCTGTA CCTCGACCGC CGCCGCAAGA AACGTCAGGT GCGCGCAGCC
CGTGGCAACG TCGCCAACAG CGGCACTGGC GACGGCTGGC TGATCGGCTT CGCCAGCCAG
AGTGGCTTTG CCGAACAGTT GGCCTGGCAG AGCGCCGAGC AGCTGCAGGC AGCTGGCCAG
CCCGTTCAGG TGCGCGCCCT TGCCGAGCTG GGTGAAAACG ACCTGCGCCA GGCCCATCGC
GCGCTCTTCG TGGTGAGTAC ATTCGGCGAC GGCGAAGCGC CCGACAGCGC TCGCGCCTTC
GAGCGAAAGG TGCTCGGCCA GCCTTGGGCA CTGAACAACC TCAACTATGC CCTGCTCGCC
CTCGGTGATC GTCAGTACCC GCACTTCTGC GGTTTCGCTC GTCGTCTCCA GGCGTGGCTG
GGGGAGCGCG GTGCCAGCAG TGCATTCAGC CCGGTGGAAG TGGACAACGC CGACAAGGCC
GCCCTGCAGC AATGGCAGCA GGAACTGGCG CAACTGACGG GCGTCCAGCC GGTGGCCGCC
TGGCAGCCGC CAACCTTTGC CAACTGGTCG CTGGTGCGCC GCAAACTGCT CAACCCCGGC
AGCCAAGGCC AACCGGTGTA CCTGCTTGGC CTGCAGGCTG CAGAACCTGC GAGCTGGGAA
GCCGGCGATC TGGTAGAGAT ACTGCCGCTG AATGGGCAGC CACGGATCGA CGCGTTCCTC
AAGGGCATGG CACTGGACGC CGGCAGCCAG GTGCAGGTGA ATGGCCTGAG TGAAACCCTT
GCCCAGGCAC TCGCTGGCCG CCAACTGCCG ACGCGCCGCG ACCACCTGAT CGGCTTGCAG
CCACAAGCGC TGGTCGATGC ACTGGTGCCA ATCGGTTGCC GCGAGTACTC CATTGCTTCG
ATCGCCAGCG ATGGTGTGCT GGAGCTGATC GTGCGCCAGG AACGCCACCC CGACGGCAGC
CTTGGCTTGG GCTCTGGCTG GCTGACCGAA TACCTGCCAA TGAATGGCAC CCTGAGCCTG
CGCCTGCGGC GTAACAGTGG CTTCCATCTG CCTGAGGCCG CTGCGCCGAT GATCCTGATC
GGCAACGGCA CTGGCCTGGC GGGTCTTCGC AGCCTGTTGC GCGCGCGGGT CAATGCCGGT
GAGCAGCGCA ACTGGCTGTT GTTCGGCGAG CGTAATCGGG CGCATGACTT GCTGTGTGGC
GATGAGCTGC ACGCTTGGCT GGACAACGGC GACCTGGCAC GGCTGGACCT GGCGTTCTCG
CGCGATCAGG CCGAGAAGGT GTATGTGCAG GACGTGATGC TGGAGCAGGC CGAGGACTTC
AAGCGCTGGG TGGCCGACGG GGCTTGCGTG TACGTCTGCG GCAGCCTGCA AGGCATGGCG
GCGGGGGTGG ATGCGGCGCT CAAAGGCATG CTGGGTGAAG CTGCTGTACA GCAGTTGATC
GAGGATGGGC GGTATCGGCG GGATGTGTAT TGA
|
|---|
| Protein sequence | MVKKTLFQLH WFFGITAGLV LALMGITGAL YSFQEELLRA FNADVLKVEV RAEGVLPPAE
LVKRVEAQQH DKVSMLWVDV REGNAARIFF MPAPGERRGE LRYADPYTGE LKGEAAGQGF
FNLMLKLHRF LAMGDTGRQI TGACTLMLVF FCLSGLYLRW PRKALDWRTW LTFDWAKKGR
AFNWDLHAVA GTWCLLFYLL FALTGLFWSY EWYREGLNKL LADAPAAGQQ QKRGEGRGRH
GPQKVDKNAP PLVVDYDAIW ANLQEAAGPG LSTYNLRLPP AGGQPANLFY LLDNAAHPRA
FNTLVLDPAT GQVKKHDRYT DKSFKAQLLQ SVYALHVGEY FGLPGRIIVT IASLTMPLFF
VTGWLLYLDR RRKKRQVRAA RGNVANSGTG DGWLIGFASQ SGFAEQLAWQ SAEQLQAAGQ
PVQVRALAEL GENDLRQAHR ALFVVSTFGD GEAPDSARAF ERKVLGQPWA LNNLNYALLA
LGDRQYPHFC GFARRLQAWL GERGASSAFS PVEVDNADKA ALQQWQQELA QLTGVQPVAA
WQPPTFANWS LVRRKLLNPG SQGQPVYLLG LQAAEPASWE AGDLVEILPL NGQPRIDAFL
KGMALDAGSQ VQVNGLSETL AQALAGRQLP TRRDHLIGLQ PQALVDALVP IGCREYSIAS
IASDGVLELI VRQERHPDGS LGLGSGWLTE YLPMNGTLSL RLRRNSGFHL PEAAAPMILI
GNGTGLAGLR SLLRARVNAG EQRNWLLFGE RNRAHDLLCG DELHAWLDNG DLARLDLAFS
RDQAEKVYVQ DVMLEQAEDF KRWVADGACV YVCGSLQGMA AGVDAALKGM LGEAAVQQLI
EDGRYRRDVY
|
|---|
| |