Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0889 |
Symbol | |
ID | 5195517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1008813 |
End bp | 1009604 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585348 |
Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
Protein accession | YP_001266235 |
Protein GI | 148546133 |
COG category | [R] General function prediction only |
COG ID | [COG0388] Predicted amidohydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.509503 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGATC TGAGTACACT GCCGAACCTG AAAGTCGCCC TGGTGCAAAC CACCTTGGCC TGGCACGACC GCGAGGCCAA CTACGCGCAC TTCGAGGTGC TGCTGGAGCA GGTGGGCGAG GTTGACCTGG TGATCCTGCC GGAAATGTTT ACCACCGGTT TTTCGATGCA ATCGGAAAGC CTGTGCGAGC CGGAGAACGG TCCGACCTAC AAATGGCTGA AGGCACAGGC CAAGAAGCAC AACGCGGTGA TTACCGGCAG TGTGATCATC CAGGCCGCCG ATGGCAGCCA CCGCAACCGC CTGTTGTGGG CGCGGCCGGA CGGCGAGATT CTGCACTACG ACAAGCGCCA CCTTTTCCGC ATGGCCGGTG AGCACAAACA TTACACCCCA GGCGAGCGGC AGGTGCAGTT CGAGCTCAAG GGCTGGCGGA TTCGCCCGCT GATCTGCTAC GACCTGCGCT TCCCTGTGTG GAGCCGTGAC GCCCAGGACA CCGACCTGCT GCTGTACACC GCCAACTGGC CGGCCGCGCG TCGCCAGCAC TGGAACCGCC TGCTGCCGGC GCGGGGCATC GAAAACCTGT GCTATGTGGC GGCGGTGAAC CGGGTGGGCA CGGACGGTAA AGGCTTTGCT TACTCTGGTG ACAGCCAGGT GCTGGATTTC CAGGGTGAGA GCCTGCTCAG TGCCGGGGAG GCGGACGGGG TGTTTACTGC AGTACTGAGC GCGGCGGAAC TGGCGGCGTA CCGGGCCAAG TTCCCGGCCA ACCTGGATGC CGATACCTTC GAGTTGCACT GA
|
Protein sequence | MRDLSTLPNL KVALVQTTLA WHDREANYAH FEVLLEQVGE VDLVILPEMF TTGFSMQSES LCEPENGPTY KWLKAQAKKH NAVITGSVII QAADGSHRNR LLWARPDGEI LHYDKRHLFR MAGEHKHYTP GERQVQFELK GWRIRPLICY DLRFPVWSRD AQDTDLLLYT ANWPAARRQH WNRLLPARGI ENLCYVAAVN RVGTDGKGFA YSGDSQVLDF QGESLLSAGE ADGVFTAVLS AAELAAYRAK FPANLDADTF ELH
|
| |