Gene Pput_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0889 
Symbol 
ID5195517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1008813 
End bp1009604 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content63% 
IMG OID640585348 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_001266235 
Protein GI148546133 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.509503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC TGAGTACACT GCCGAACCTG AAAGTCGCCC TGGTGCAAAC CACCTTGGCC 
TGGCACGACC GCGAGGCCAA CTACGCGCAC TTCGAGGTGC TGCTGGAGCA GGTGGGCGAG
GTTGACCTGG TGATCCTGCC GGAAATGTTT ACCACCGGTT TTTCGATGCA ATCGGAAAGC
CTGTGCGAGC CGGAGAACGG TCCGACCTAC AAATGGCTGA AGGCACAGGC CAAGAAGCAC
AACGCGGTGA TTACCGGCAG TGTGATCATC CAGGCCGCCG ATGGCAGCCA CCGCAACCGC
CTGTTGTGGG CGCGGCCGGA CGGCGAGATT CTGCACTACG ACAAGCGCCA CCTTTTCCGC
ATGGCCGGTG AGCACAAACA TTACACCCCA GGCGAGCGGC AGGTGCAGTT CGAGCTCAAG
GGCTGGCGGA TTCGCCCGCT GATCTGCTAC GACCTGCGCT TCCCTGTGTG GAGCCGTGAC
GCCCAGGACA CCGACCTGCT GCTGTACACC GCCAACTGGC CGGCCGCGCG TCGCCAGCAC
TGGAACCGCC TGCTGCCGGC GCGGGGCATC GAAAACCTGT GCTATGTGGC GGCGGTGAAC
CGGGTGGGCA CGGACGGTAA AGGCTTTGCT TACTCTGGTG ACAGCCAGGT GCTGGATTTC
CAGGGTGAGA GCCTGCTCAG TGCCGGGGAG GCGGACGGGG TGTTTACTGC AGTACTGAGC
GCGGCGGAAC TGGCGGCGTA CCGGGCCAAG TTCCCGGCCA ACCTGGATGC CGATACCTTC
GAGTTGCACT GA
 
Protein sequence
MRDLSTLPNL KVALVQTTLA WHDREANYAH FEVLLEQVGE VDLVILPEMF TTGFSMQSES 
LCEPENGPTY KWLKAQAKKH NAVITGSVII QAADGSHRNR LLWARPDGEI LHYDKRHLFR
MAGEHKHYTP GERQVQFELK GWRIRPLICY DLRFPVWSRD AQDTDLLLYT ANWPAARRQH
WNRLLPARGI ENLCYVAAVN RVGTDGKGFA YSGDSQVLDF QGESLLSAGE ADGVFTAVLS
AAELAAYRAK FPANLDADTF ELH