Gene Pput_0864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0864 
SymbolyajC 
ID5192044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp985974 
End bp986309 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content58% 
IMG OID640585323 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001266210 
Protein GI148546108 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.226856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.522349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT TCATCCCCGC CGCATACGCG GACGCTGCAG CACCTGCCGC TGGCCCAGCC 
GGTACCGGCT TCGAGTGGAT TTTCCTGGTC GGTTTCCTGG TCATCTTCTA CCTGATGATC
TGGCGCCCGC AGGCCAAGCG CGCGAAAGAG CAGAAGAACC TGCTGAGCAA CTTGCAGAAA
GGTGACGAAG TTGTCACCAA CGGCGGCATC GCCGGCAAGA TCGTCAAGGT TTCCGATGAC
TTCGTGGTGC TGGAAGTGTC CGACACTGTC GAGCTGAAGT TCCAGAAGGG TGCCATTGCT
GCCACCCTGC CAAAAGGTAC GCTCAAGGCT ATCTGA
 
Protein sequence
MSFFIPAAYA DAAAPAAGPA GTGFEWIFLV GFLVIFYLMI WRPQAKRAKE QKNLLSNLQK 
GDEVVTNGGI AGKIVKVSDD FVVLEVSDTV ELKFQKGAIA ATLPKGTLKA I