Gene Pput_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0808 
Symbol 
ID5194100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp902364 
End bp903092 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640585267 
Productputative sulfate transport protein CysZ 
Protein accessionYP_001266155 
Protein GI148546053 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2981] Uncharacterized protein involved in cysteine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00684995 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0715554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCC CTGTCCTCTC TGGCCCCCAA TACCTGCGCG AAGGCCTGAA ACTGGTGCTG 
AGCCCCAACC TGCGGTTGTT CGTGCTGCTG CCACTGGCAG TCAACCTGTT GCTGTTCGGT
GGCCTGATCT ACTTCGCCGG CCACCAGTTC GGCCTGTGGC TCGATGCCCT GATGCCCACG
CTGCCTGACT GGCTGAGCTT CCTCAGCTAC ATCCTCTGGC CGCTGTTCGT TGCCTTGCTG
GTGCTGATGG TGTTCTTCAC CTTCACCTTG GTGGCCAACA TCATTGCCGC GCCGTTCAAC
GGTTTTCTGG CGGAAAAGGT CGAGGTGGTA GTGCGTGGCG AAGACACCTT CCCAGCCTTC
AGCTGGGGCG AGCTGGCAGC CATGGTACCG CGCACCTTCA GCCGCGAAAT GCGCAAGCTG
GGCTACTTCC TGCCACGCGC CATCGGCCTG TTCATCCTGT CGCTGATCCC GGTGGTCAAC
GTGGTGGCTG CGCCGCTATG GCTGATCTTC GGCGTGTGGA TGATGGCCAT CCAGTACATC
GACTACCCGG CGGACAACAA CAAGATGAGC TGGCAGGACA TGCTCGCTTG GCTGCGGCAG
AAGCGCTGGC AGAGCCTGGG CTTTGGCGGC ATCACCTACC TGGCGCTGAT GATTCCAGGC
GTGAACGTGC TGATGATGCC GGCGGCGGTG GCCGGGGCTA CGTTGTTCTG GGTGCGGGAG
CGGAGCTGA
 
Protein sequence
MQAPVLSGPQ YLREGLKLVL SPNLRLFVLL PLAVNLLLFG GLIYFAGHQF GLWLDALMPT 
LPDWLSFLSY ILWPLFVALL VLMVFFTFTL VANIIAAPFN GFLAEKVEVV VRGEDTFPAF
SWGELAAMVP RTFSREMRKL GYFLPRAIGL FILSLIPVVN VVAAPLWLIF GVWMMAIQYI
DYPADNNKMS WQDMLAWLRQ KRWQSLGFGG ITYLALMIPG VNVLMMPAAV AGATLFWVRE
RS