Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0808 |
Symbol | |
ID | 5194100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 902364 |
End bp | 903092 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585267 |
Product | putative sulfate transport protein CysZ |
Protein accession | YP_001266155 |
Protein GI | 148546053 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2981] Uncharacterized protein involved in cysteine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00684995 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0715554 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCCC CTGTCCTCTC TGGCCCCCAA TACCTGCGCG AAGGCCTGAA ACTGGTGCTG AGCCCCAACC TGCGGTTGTT CGTGCTGCTG CCACTGGCAG TCAACCTGTT GCTGTTCGGT GGCCTGATCT ACTTCGCCGG CCACCAGTTC GGCCTGTGGC TCGATGCCCT GATGCCCACG CTGCCTGACT GGCTGAGCTT CCTCAGCTAC ATCCTCTGGC CGCTGTTCGT TGCCTTGCTG GTGCTGATGG TGTTCTTCAC CTTCACCTTG GTGGCCAACA TCATTGCCGC GCCGTTCAAC GGTTTTCTGG CGGAAAAGGT CGAGGTGGTA GTGCGTGGCG AAGACACCTT CCCAGCCTTC AGCTGGGGCG AGCTGGCAGC CATGGTACCG CGCACCTTCA GCCGCGAAAT GCGCAAGCTG GGCTACTTCC TGCCACGCGC CATCGGCCTG TTCATCCTGT CGCTGATCCC GGTGGTCAAC GTGGTGGCTG CGCCGCTATG GCTGATCTTC GGCGTGTGGA TGATGGCCAT CCAGTACATC GACTACCCGG CGGACAACAA CAAGATGAGC TGGCAGGACA TGCTCGCTTG GCTGCGGCAG AAGCGCTGGC AGAGCCTGGG CTTTGGCGGC ATCACCTACC TGGCGCTGAT GATTCCAGGC GTGAACGTGC TGATGATGCC GGCGGCGGTG GCCGGGGCTA CGTTGTTCTG GGTGCGGGAG CGGAGCTGA
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Protein sequence | MQAPVLSGPQ YLREGLKLVL SPNLRLFVLL PLAVNLLLFG GLIYFAGHQF GLWLDALMPT LPDWLSFLSY ILWPLFVALL VLMVFFTFTL VANIIAAPFN GFLAEKVEVV VRGEDTFPAF SWGELAAMVP RTFSREMRKL GYFLPRAIGL FILSLIPVVN VVAAPLWLIF GVWMMAIQYI DYPADNNKMS WQDMLAWLRQ KRWQSLGFGG ITYLALMIPG VNVLMMPAAV AGATLFWVRE RS
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