Gene Pput_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0720 
SymbolrplU 
ID5193317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp807514 
End bp807828 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content54% 
IMG OID640585178 
Product50S ribosomal protein L21 
Protein accessionYP_001266068 
Protein GI148545966 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0261] Ribosomal protein L21 
TIGRFAM ID[TIGR00061] ribosomal protein L21 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.456821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0127169 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACG CAGTAATCGT TACCGGCGGC AAGCAGTACA AAGTCGCTGA AGGTGAATTC 
CTCAAGATCG AAAAACTGGA AGTCGCCACT GGCGAATCCG TGACCTTCGA TCGCGTTCTG
CTGGTCGCCA ACGGTGAAGA AGTCACCATC GGTGCTCCAG TTGTTGCTGG CGCTAAAGTA
GTGGCCGAAG TCGTTTCGCA AGGCCGCCAC GACAAGGTTC GCATCATCAA GTTCCGTCGT
CGTAAGCACC ACATGAAGCG TATGGGCCAC CGCCAGTGGT TCACCGAGAT CAAAATCACC
GGCATCCAGG CTTAA
 
Protein sequence
MSYAVIVTGG KQYKVAEGEF LKIEKLEVAT GESVTFDRVL LVANGEEVTI GAPVVAGAKV 
VAEVVSQGRH DKVRIIKFRR RKHHMKRMGH RQWFTEIKIT GIQA