| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0662 |
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| Symbol | |
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| ID | 5195172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 746527 |
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| End bp | 747546 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585117 |
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| Product | DNA uptake lipoprotein-like protein |
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| Protein accession | YP_001266014 |
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| Protein GI | 148545912 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.429425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0753816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTGA AACACCTGCT GCTGATCGCC ATCCTCGGGC TTACCGCGGC CTGTTCCTCT
AATAAAGAGG TCATTGACGA GAACCTCAGC GAGGCCGAAC TGTACCAGCA GGCCCAGGCT
GATCTGGACA ACTCCAGCTA CACCAGCGCC GTGAACAAGC TCAAGGCCCT GGAGTCGCGC
TACCCGTTCG GCCGCTATGC CGATCAGGCG CAGCTCGAGC TGATTTACGC CAACTACAAG
AATGCCGAGC CCGAGGCTGC CAAGTCGGCC GCCGAGCGCT TTATCCGCCT GCACCCGCAG
CACCCGAACG TCGATTACGC CTACTACCTC AAGGGCCTGA CCTCGTTCGA CCAGGACCGT
GGCCTGCTGG CGCGCTTCCT GCCGTTGGAC ATGACCAAAC GTGACCCGGG CGCCGCCCGC
GACTCGTACA ACGAGTTCGC CCAGCTGACC AGCCGTTTCC CCAACAGCCG CTACGCGCCA
GACGCCAAGC AGCGCATGAT CTACCTGCGC AACCTGCTGG CCTCGTACGA AATCCACGTG
GCCGACTACT ACCTGAGCCG CCAGGCTTAT GTAGCGGCTG CCAACCGTGG CCGCTACGTG
GTCGAAAACT TCCAGGAAAC CCCGTCCGTC GGTGACGGCC TGGCGGTGAT GGTCGAGTCG
TACCAGAAGC TGCACCTGGA CGAACTGGCC GCCACGAGCC TGGAAACCCT CAAGCTCAAC
TACCCGGACC ACCCGAGCCT GGTCGATGGC GAGTTCCAGC CCAAGCAGAC CGAGTCTGAC
GGCCGCGGCT GGCTGTCCAA GGCCACCTTG GGCCTGATCG AAACCGATAC CCCGCTGCCG
CCAGGCGAAA CCCGCGCCAA CCAGGACGTG GTCAAGCAGT TCCAGGACGC GCGCGACGAG
ATGCCGCGAG AGCTGCTGCC TAAAGACGAG AACGGCGACC CGATCGTGCC GGAAGGCCCG
AAAGAAGCCG AGAAAGACCG TTCCTGGTTC AGCTACATGA CCTTTGGTCT GTTCGACTGA
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| Protein sequence | MRVKHLLLIA ILGLTAACSS NKEVIDENLS EAELYQQAQA DLDNSSYTSA VNKLKALESR
YPFGRYADQA QLELIYANYK NAEPEAAKSA AERFIRLHPQ HPNVDYAYYL KGLTSFDQDR
GLLARFLPLD MTKRDPGAAR DSYNEFAQLT SRFPNSRYAP DAKQRMIYLR NLLASYEIHV
ADYYLSRQAY VAAANRGRYV VENFQETPSV GDGLAVMVES YQKLHLDELA ATSLETLKLN
YPDHPSLVDG EFQPKQTESD GRGWLSKATL GLIETDTPLP PGETRANQDV VKQFQDARDE
MPRELLPKDE NGDPIVPEGP KEAEKDRSWF SYMTFGLFD
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