Gene Pput_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0624 
Symbol 
ID5192056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp702548 
End bp702958 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID640585076 
ProductMerR family transcriptional regulator 
Protein accessionYP_001265976 
Protein GI148545874 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02044] Cu(I)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG GCCAGGCCGC CCGCCGCAGC GGGCTCAGCA CCAAGATGAT CCGTTACTAC 
GAGTCCATCG GCCTGCTCAA ACCCGCCACT CGCAGCGACA GCGGCTACCG CCTGTACCAG
GCGCAAGACT TGCACAACCT GGCCTTCATC AAACGCTCCC GCGACCTGGG CTTTTCCCTC
GAAGAGGTCG GCAAGTTGCT GACCTTGTGG CAGGACCGCC AACGTGCCAG CGCCGATGTG
AAGGCGCTGG CCATGCACCA CATCGATGAA CTGAACCGGC GCATCGAGGA GCTGGTGAGC
CTGCGCGACA CCCTCGGCGA GCTGGTTTCG CACTGCCAGG GTGACGACCG CCCGGACTGC
CCGATCCTCA AAGACCTGGC CAATGGCGCT GCGGGCAGCT GCTGTCACTG A
 
Protein sequence
MNIGQAARRS GLSTKMIRYY ESIGLLKPAT RSDSGYRLYQ AQDLHNLAFI KRSRDLGFSL 
EEVGKLLTLW QDRQRASADV KALAMHHIDE LNRRIEELVS LRDTLGELVS HCQGDDRPDC
PILKDLANGA AGSCCH