| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0615 |
|---|
| Symbol | |
|---|
| ID | 5192453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 693524 |
|---|
| End bp | 694093 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640585067 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001265967 |
|---|
| Protein GI | 148545865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.157882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGCC GTCTCGTTCT ACTGTCATTC GCGTTAGTGC TCGCTGCCTG CTCGAGCAAT
AACGTCCAGC AGGATTTCGA TGCCAGCCGC GATTTTGCCG CCTACCGCAG CTGGGCATGG
CAGGAGCCAG GCCTGCAGTA CCGCCCGGAT GACCCGCGGA TCAAGAGCGA CCTCACCGAG
CAGCGCATTC GCCAGGCGGT GGCAGACCAA CTCGACCAGC GCGGCCTGCG TCCGGTACAA
GGCGGAGCGC GGCCCGACCT GGCAGTACGC ACATACCTGA TCGTGGAGCA GCGCCAACAA
CAGATCACCA CCAACTACGG CGGTGGCTGG GGTGGCTACT GGGGCGGCTA CTGGGGTGGC
CCGATGTACA ACGAAACCCG CAGTGTCGAC TACAAGGTCG CCACCATCCA GGTCGACATG
TTCGATGGGC GTGACGGCAA GCTGGTATGG CGCGGCAGTG CCGAGCAGAT CATGAACAAC
TACCCGCCAA GCCCGGAAGA ACGTAACAGC GCAATCCGCA ACACCGTGGC CAAGGTGCTG
GGCAACTACC CACCGGGCAG CAAAAAATAG
|
|---|
| Protein sequence | MLRRLVLLSF ALVLAACSSN NVQQDFDASR DFAAYRSWAW QEPGLQYRPD DPRIKSDLTE
QRIRQAVADQ LDQRGLRPVQ GGARPDLAVR TYLIVEQRQQ QITTNYGGGW GGYWGGYWGG
PMYNETRSVD YKVATIQVDM FDGRDGKLVW RGSAEQIMNN YPPSPEERNS AIRNTVAKVL
GNYPPGSKK
|
|---|
| |