| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0584 |
|---|
| Symbol | |
|---|
| ID | 5195491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 650709 |
|---|
| End bp | 652229 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640585036 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_001265936 |
|---|
| Protein GI | 148545834 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.520891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTATG CACATCCCGG TACCGAAGGC GCGAAGGTTT CCTTCAAGAG CCGCTACGGC
AACTACATCG GTGGTGAGTT CGTTACTCCG GTAAAGGGGC CGTACTTCGA TAATACCTCC
CCGGTGAATG GCAAGCTGAT CGCTGAATTC CCCCGCTCTA CTGCCGAAGA CATCGAGAAG
GCCCTGGATG CCGCCCATGC TGCGGCCGAC GCCTGGGGCC GCACTTCAGT GCAGGATCGC
TCCAACGTGC TGCTGAAGAT CGCCGACCGT ATCGAGCAGA ACCTCGAATT GCTGGCCATC
ACCGAAACCT GGGACAACGG TAAGCCGATC CGCGAAACCC TCAACGCCGA CATTCCGCTG
GCGGTCGACC ACTTCCGCTA TTTCGCTGGC TGCATCCGCG CCCAGGAAGG CGGCGCTGCC
GAAATCAATG AAGGCACCGT GGCCTACCAC ATCCACGAGC CACTGGGCGT GGTCGGGCAG
ATCATCCCCT GGAACTTCCC GATCCTGATG GCTGCCTGGA AGCTTGCCCC GGCACTGGCC
GCTGGTAACT GCGTGGTGCT CAAGCCTGCC GAACAGACGC CGCTGGGCAT CACCGTGCTG
CTCGAAGTCA TTGGCGACCT GCTGCCACCT GGCGTGCTCA ACGTCGTGCA AGGCTATGGC
CGCGAAGCCG GTGAAGCCCT GGCCACCAGC AAACGCATCG CCAAGATCGC CTTCACCGGC
TCTACCCCGG TCGGCTCGCA CATCATGAAA TGCGCCGCCG AGAACATCAT CCCGTCAACC
GTCGAACTGG GTGGCAAGTC GCCGAACGTG TACTTCGAAG ACATCATGCA GGCCGAGCCA
AGCTTCATCG AGAAGGCGGC AGAAGGCATG GTGCTGGCGT TCTTCAACCA GGGCGAAGTG
TGCACCTGCC CGTCGCGAGC CCTGGTGCAA GAGTCGATCT ATCCGCAGTT CATGGAAGTG
GTGATGAAGA AGGTGCTGCA GATCAAGCGC GGCGACCCGC TGGACACCGA CACCATGGTC
GGCGCCCAGG CCTCGCAGCA GCAGTTCGAA AAGATCCTCT CGTACCTGCA GATCGCCCAG
GACGAAGGCG CCGAGTTGCT CACCGGCGGC AAGGTCGAGA AGCTGGAAGG TTCGCTGGCT
ACCGGTTACT ACATCCAGCC GACCCTGCTC AAGGGCAACA ACAAGATGCG CGTGTTCCAG
GAAGAAATCT TCGGCCCGGT GGTCAGCGTC ACCACCTTCA AAGACGAAGC CGAAGCACTG
GCGATTGCCA ACGACACCGA GTTCGGCCTG GGCGCCGGCG TGTGGACCCG CGACATCAAC
CGTGCCTACC GCATGGGCCG CGGCATCAAG GCTGGCCGTG TGTGGACCAA CTGCTACCAC
CTGTACCCGG CGCATGCCGC GTTCGGCGGT TACAAGAAGT CGGGGGTTGG GCGTGAGACG
CACAAGATGA TGCTGGATCA CTATCAGCAG ACCAAGAACC TGCTGGTGAG CTACGACATC
AATCCGCTGG GCTTCTTCTA G
|
|---|
| Protein sequence | MRYAHPGTEG AKVSFKSRYG NYIGGEFVTP VKGPYFDNTS PVNGKLIAEF PRSTAEDIEK
ALDAAHAAAD AWGRTSVQDR SNVLLKIADR IEQNLELLAI TETWDNGKPI RETLNADIPL
AVDHFRYFAG CIRAQEGGAA EINEGTVAYH IHEPLGVVGQ IIPWNFPILM AAWKLAPALA
AGNCVVLKPA EQTPLGITVL LEVIGDLLPP GVLNVVQGYG REAGEALATS KRIAKIAFTG
STPVGSHIMK CAAENIIPST VELGGKSPNV YFEDIMQAEP SFIEKAAEGM VLAFFNQGEV
CTCPSRALVQ ESIYPQFMEV VMKKVLQIKR GDPLDTDTMV GAQASQQQFE KILSYLQIAQ
DEGAELLTGG KVEKLEGSLA TGYYIQPTLL KGNNKMRVFQ EEIFGPVVSV TTFKDEAEAL
AIANDTEFGL GAGVWTRDIN RAYRMGRGIK AGRVWTNCYH LYPAHAAFGG YKKSGVGRET
HKMMLDHYQQ TKNLLVSYDI NPLGFF
|
|---|
| |