| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0517 |
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| Symbol | |
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| ID | 5192867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 584715 |
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| End bp | 586109 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584971 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001265871 |
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| Protein GI | 148545769 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0921044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGACA CCCACAACGA GCGTATGAGT GGCGGCGAAA CCCGCGCCGC TGGCGGCCTT
GCCCTGGTCT TTGCCTTTCG TATGCTGGGC ATGTTCATGG TCTTGCCGGT ACTGGCCACC
TACGGCATGG ACCTGGCTGG TGCCACGCCT GCCCTGATCG GCCTGGCCAT TGGTGCCTAT
GGCCTGACTC AGGCGGTATT GCAGATCCCG TTCGGGATGG TTTCCGACCG AATCGGTCGC
CGGCCGGTGA TTTATCTGGG GCTGGTGATC TTTGCCCTGG GCAGTGTGCT GGCGGCCCAG
GCTGACTCTA TCTGGGGCGT GATTGCCGGG CGCATCCTGC AGGGCGCGGG GGCAATTTCT
GCCGCGGTGA TGGCACTGCT GTCGGACCTC ACCCGCGAAC AACACCGGAC CAAGGCCATG
GCCATGATCG GCATGAGCAT CGGGCTGTCG TTTGCTGTCG CCATGGTCGT TGGTCCATTG
CTGACAAGTG CCTTTGGTTT GTCAGGTTTG TTCCTGGTTA CGGCCGGGCT TGCCTTGGTC
GGCATCCTGT TGATCGCGTT TGTCGTACCC AACACCCACA GCATTTTGCA GCACCGCGAG
TCGGGGGTGG CGCGCCAAGC CATCGGCCCG ACACTGCGTC ATCCGGACCT TCTGCGCCTG
GACATAAGCA TTTTCATCCT GCACGCCGTC CTCATGGCCA GCTTCGTTGC GCTGCCACTG
GCGTTCGTCG AGCGTGGCGG CCTGCCCAAG GAGCAGCACT GGTGGGTGTA CCTGACTGCG
CTGTTCATCT CATTTTTTGC AATGGTCCCG TTCATCATCT ACGGCGAAAA AAAGCGCAAG
ATGAAACGTG TGTTGGCCGG CGCAGTCAGC GTCTTGCTGC TCACAGAGAT ATACTTCTGG
GAGTGGGCTG ACGGTTTGCG CGGACTGGTG ATTGGCACCG TGGTATTCTT TACCGCATTC
AACCTGCTGG AGGCTTCGCT GCCTTCTCTG GTGAGCAAGG TATCGCCTGC CGGTGGCAAG
GGGACGGCAA TGGGGGTGTA TTCCACCAGC CAGTTCCTCG GTGCAGCGTT AGGCGGGATC
CTTGGCGGCT GGCTGTTCCA GCACGGTGGG CTGAACACGG TGTTCCTCGG TAGCGCGGTG
CTGTGTGCTA TCTGGCTGAT CGTCGCCTTG CGCATGAACG AGCCGCCATA TGTGACCAGC
CTGCGCATGC CCCTGACGCC TGAGGCGGTC CGGGAAGCCG GCCTGACCGA GCGCCTGATG
GCCGTGCCGG GTGTGACCGA CGCTGTGGTG GTGGCAGAAG AAGCCGCCAT CTATATCAAA
CTGGATACGA AAATTTTGGA CCGTGCGACC CTCGAGCGAC TGGTGAATCC AGCCTCTTCG
GCGTGCGAAG CCTAG
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| Protein sequence | MHDTHNERMS GGETRAAGGL ALVFAFRMLG MFMVLPVLAT YGMDLAGATP ALIGLAIGAY
GLTQAVLQIP FGMVSDRIGR RPVIYLGLVI FALGSVLAAQ ADSIWGVIAG RILQGAGAIS
AAVMALLSDL TREQHRTKAM AMIGMSIGLS FAVAMVVGPL LTSAFGLSGL FLVTAGLALV
GILLIAFVVP NTHSILQHRE SGVARQAIGP TLRHPDLLRL DISIFILHAV LMASFVALPL
AFVERGGLPK EQHWWVYLTA LFISFFAMVP FIIYGEKKRK MKRVLAGAVS VLLLTEIYFW
EWADGLRGLV IGTVVFFTAF NLLEASLPSL VSKVSPAGGK GTAMGVYSTS QFLGAALGGI
LGGWLFQHGG LNTVFLGSAV LCAIWLIVAL RMNEPPYVTS LRMPLTPEAV REAGLTERLM
AVPGVTDAVV VAEEAAIYIK LDTKILDRAT LERLVNPASS ACEA
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