Gene Pput_0483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0483 
Symbol 
ID5191914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp561740 
End bp562210 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID640584936 
Product30S ribosomal protein S7 
Protein accessionYP_001265837 
Protein GI148545735 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0139239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0328546 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAGAC GTCGTGTAGC AGCAAAACGT GAGATCCTTG ACGATCCGAA GTACGGATCC 
CAGATCCTCG CGAAGTTCAT GAACCACGTG ATGGAAAGCG GCAAGAAGGC CGTAGCCGAG
CGCATCGTTT ACGGTGCCCT GGATACCGTC AAAGCACGCA AGAACAGCGA CCCCCTGGAA
ATCTTCGAGA AAGCTCTCGA CGCCATCGCT CCGCTGGTCG AAGTAAAGTC CCGTCGTGTC
GGCGGTGCCA CTTACCAGGT TCCGGTTGAA GTTCGTCCAT CCCGTCGTAA CGCTCTGGCA
ATGCGCTGGC TCGTAGACTA CGCCCGCAAG CGCGGCGAGA AGTCGATGGC TCTGCGTCTG
GCCGGCGAGC TGCTGGATGC TGCCGAAGGC AAGGGTGCTG CAGTCAAGAA GCGTGAAGAC
GTTCACCGTA TGGCTGAAGC CAACAAAGCG TTCTCGCACT ACCGCTTCTA A
 
Protein sequence
MPRRRVAAKR EILDDPKYGS QILAKFMNHV MESGKKAVAE RIVYGALDTV KARKNSDPLE 
IFEKALDAIA PLVEVKSRRV GGATYQVPVE VRPSRRNALA MRWLVDYARK RGEKSMALRL
AGELLDAAEG KGAAVKKRED VHRMAEANKA FSHYRF