Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0469 |
Symbol | |
ID | 5192381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 538063 |
End bp | 539262 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640584913 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_001265823 |
Protein GI | 148545721 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000169724 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000126716 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGTCGG TTGAAGAGCA GCTGGCGCTT ATCAAGCGCG GTGCGGAAGA AGTACTGGTC GAGTCGGAAC TGGTGGAGAA GCTCAAGCGC GGCCAACCTC TGCGCATCAA GGCCGGCTTC GACCCGACCG CTCCGGACCT GCACCTGGGT CACACGGTGC TGATCAACAA GCTGCGCCAG TTCCAGGATC TGGGCCACCA GGTCATCTTC CTGATCGGTG ACTTCACCGG CATGATCGGT GACCCGAGTG GCAAGAGCGC CACGCGCCCG CCGCTGACCC GCGAACAGGT GCTGGAGAAC GCCGAGACGT ACAAGCAGCA GGTGTTCAAG ATTCTTGACC CGGCCAAGAC TGAAGTCGCG TTCAACTCCA CGTGGATGGA CAAGCTGACC CCTGCCGACT TCATTCGCCT GGCTTCGCAG TACACCGTCG CGCGCATGCT GGAGCGTGAT GACTTCGACA AGCGTTACAC CACCAATCAG CCGATTGCCA TCCACGAGTT CCTCTACCCG CTGGTGCAAG GCTATGACTC GGTGGCGCTG AAGGCGGATG TTGAGCTGGG TGGTACCGAC CAGAAGTTCA ACCTGCTGAT GGGGCGTGAA CTGCAGCGGT CTTATGGGCA GGAAGCGCAG AACATCGTGA CCATGCCACT GCTCGAAGGG CTCGACGGTG TGAAGAAGAT GTCGAAGTCG CTGGGCAACT ATGTCGGCAT CCAGGAAGCG CCAGGGGTGA TGTACAGCAA GCTGGTGTCG ATCCCGGATA CCCTGATGTG GCGTTACTTC GAGCTGCTGA GCTTCCGTTC GATGGAAGAA ATCGAGCAGT TCCGGGCCGA TGTTGCCAAT GGCGCCAACC CACGTGACAT CAAGATCAAG CTGGCGGAAG AAATTGTGGC GCGCTTCCAC GGTGAGGAGG CTGCAGCCAA TGCTCACCGT GCTGCCGGTA ACCGTATGAA GGAAGGCGAG CTGCCGGAAG ACTTGCCGGA GATCGAAGTG GCTGCGGCGG AAGACCTGCC AATTGCTGCG GTGTTGAATC GGGCTGGTCT GGTCAAGAAC TCGGCTCAGG CGCGAGATTT GCTGAGTGGC GGCGCGGTGA AGGTTGATGG TGCAGTGGTC GACAAGGACT TCATGTTTGT CCTTGGTGCT ACGCATGTGT GCCAGGCGGG CAAGAAGTCG TTTGGCCGGG TCACCCTCAA GGCAGAGTAA
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Protein sequence | MKSVEEQLAL IKRGAEEVLV ESELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ FQDLGHQVIF LIGDFTGMIG DPSGKSATRP PLTREQVLEN AETYKQQVFK ILDPAKTEVA FNSTWMDKLT PADFIRLASQ YTVARMLERD DFDKRYTTNQ PIAIHEFLYP LVQGYDSVAL KADVELGGTD QKFNLLMGRE LQRSYGQEAQ NIVTMPLLEG LDGVKKMSKS LGNYVGIQEA PGVMYSKLVS IPDTLMWRYF ELLSFRSMEE IEQFRADVAN GANPRDIKIK LAEEIVARFH GEEAAANAHR AAGNRMKEGE LPEDLPEIEV AAAEDLPIAA VLNRAGLVKN SAQARDLLSG GAVKVDGAVV DKDFMFVLGA THVCQAGKKS FGRVTLKAE
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