Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0387 |
Symbol | |
ID | 5195528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 449276 |
End bp | 450007 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584833 |
Product | amidophosphoribosyltransferase-like protein |
Protein accession | YP_001265744 |
Protein GI | 148545642 |
COG category | [R] General function prediction only |
COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
TIGRFAM ID | [TIGR00201] comF family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.336558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.927727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTGTC AACTGCACTG GAAGCGACTG GTTTACAAGT GGTCACTTAT TAATCAGAAA TGCTTGTTAT GTGATGAGCC TGCCGAGCAG CATTACCCGC TGTGCATCAC CTGCGAACAG GCGCTGCCCT GGCTGGGTGA TCAGTGCCGG CATTGCGCCC TGCCCTTGCC CATGGCCGGC TTGACCTGCG CCCCGTGTGG CCGCGGCTTG CCGGCCTTCG ATCAGGTCAT TGCCCTGTGG CATTTCGGCT TTCCGGTGGA CACGTTGATC AGCCGTTTCA AGCACAATCG CCAATGGCCT TTGGGGCGCC TGATGGCTGA GCTGCTGGGG CACGGGCTGC TGTATCGCTA TGCCGAAGGG TTGCCTCGCC CTGACCTGCT GTTGCCTGTG CCTTTGGCCA GGCGTCGACT GCGCGAGCGG GGGTTCAATC AGGCGGGGAT GCTTGGGCGG TGGTTGTCGT CGCACATCGG CGTAACCTGC AACGAGCGTT TGCTGGTCCG CACCCGCGAG ACACCGGCAC AGCAACATCT GGGCGCCAAG GCACGGCAGC GCAATTTGCG CCAGGCGTTC GCGGTCATGG GCAAACTGCA AGGCAAGCAT GTCGCCATCG TCGATGATGT GTTGACCACC GGTGCCACTG CGCAGGCTAT CGCCCAGGCA CTGCGCAAGG CAGGTGCGCG GCAGGTGGAT GTGTATTGCC TGGCACGTAC GCCCAAACCG GGGTATGTAT GA
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Protein sequence | MNCQLHWKRL VYKWSLINQK CLLCDEPAEQ HYPLCITCEQ ALPWLGDQCR HCALPLPMAG LTCAPCGRGL PAFDQVIALW HFGFPVDTLI SRFKHNRQWP LGRLMAELLG HGLLYRYAEG LPRPDLLLPV PLARRRLRER GFNQAGMLGR WLSSHIGVTC NERLLVRTRE TPAQQHLGAK ARQRNLRQAF AVMGKLQGKH VAIVDDVLTT GATAQAIAQA LRKAGARQVD VYCLARTPKP GYV
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