Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0371 |
Symbol | |
ID | 5192594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 428775 |
End bp | 429527 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640584817 |
Product | lipopolysaccharide kinase |
Protein accession | YP_001265728 |
Protein GI | 148545626 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.605574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATT ACCTGGCCAG CGCGGACCTC GCGCTGCTCA AGCGCCATGG CCTGGACAAC TTCGAGGCAC TGTGGGCGCT GCAACTTGAT GCTGTGGACG AACCCAACAC CGGCCGTGGT GGCTGGAGCA GCGTCTTCCG TCTGGAACTC GAAGGCAAGG GCTACTACCT CAAGCGCCAG AGCGACTACC TGACCCGTAC CTTGCACCGG CCGTTCGGCG AGCCCACCTT CGCCCGCGAA TTCCGCAACA TCAGTCGCTA CCAGAAGCTG CGCATTCCGG CATTGCAGGC GGTGTTCTAC GGCGAGCGCA AGCAGGGCGG CAAGCACCGG GCTATCCTGA TGACCCGCGC TCTGGACGAG TGGGCCGACC TCGACAGCCT GCTGGCGCAG TGGCCGCGGT TGGGTGAAGC CGAGCGCACT GGCATCCTGC AGGCCTGCGG TCAGCTGGCG CGCACCCTGC ACAGCGCCGG CCAGGTGCAT GGCTGCTTCT ACCCCAAGCA CATTTTCCTG CGTCAACGCC GCGAGGGTTG GGACGCGCAA TTGATCGACC TGGAAAAGAC CCGGCCGCTG CTGTTCGGCA TGCGTGACCG CCTCAAGGAC CTGGAGCCGC TGCTGCGCCG CGCGCAGGCC TGGCGCGTGC AGGATGTACG TACTTTGCTG GCGACCTACC TGGGGCAGCC GGCTGACGGC GCGCTGGTCG ACACCTGGCT GCAACGGCTG ACGCAACGCC GTCGTGAAAA AGAGGCTCGC TGA
|
Protein sequence | MTDYLASADL ALLKRHGLDN FEALWALQLD AVDEPNTGRG GWSSVFRLEL EGKGYYLKRQ SDYLTRTLHR PFGEPTFARE FRNISRYQKL RIPALQAVFY GERKQGGKHR AILMTRALDE WADLDSLLAQ WPRLGEAERT GILQACGQLA RTLHSAGQVH GCFYPKHIFL RQRREGWDAQ LIDLEKTRPL LFGMRDRLKD LEPLLRRAQA WRVQDVRTLL ATYLGQPADG ALVDTWLQRL TQRRREKEAR
|
| |