Gene Pput_0337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0337 
Symbol 
ID5191554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp384579 
End bp385679 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content62% 
IMG OID640584783 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_001265694 
Protein GI148545592 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG2871] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00256748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.662502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATA CCTTCCTCAA TCCGGTCACT ACCCAGACCT GGGCCAACGG CCGCCACATC 
GTGCGCTGCG TCAAGGTCAT CCAGGAGACC TGGGACGTGC GCACCTTCTG CTTCATGGCC
GACCAGCCGA TCATGTTCTT CTTCAAGCCA GGGCAGTTCG TCACCCTGGA GCTGGAGATC
GAAGGCAAGC CGGTGATGCG CTCCTACACC ATCTCCAGTT CGCCGTCAGT GCCGTACAGC
TTCTCGATCA CCGTCAAGCG TGTGCCGGGT GGCCTGGTGT CGAACTTCCT GCACGACACC
ATGCACGAAG GCGCCGAGCT GCCGGTGCAC GGCCCGGTGG GGCTGTTCAA CGCCATCGAC
TTCCCTGCTG GCAAGGTGCT GTACCTGTCG GGCGGCGTCG GTATTACCCC AGTGATGTCG
ATGGCGCGCT GGTTCTACGA CACCAATGCC AACGTCGACA TGGTGTTCGT CCACAGCGCC
CGTTCGCCGA AAGACATCAT CTACCACCGC GAGCTGGAGC AGATGGCGTC GCGCATCCCC
AACTTCAGCC TGCACATCAT TTGCGAAAAG CATGGCCTGG GCGAGCCGTG GGCGGGTTAC
CGCGGTTACC TGAACCAGCG GCTGATGGAG TTGATTGCGC CGGACTACAT GGAGCGCGTT
GTGTTCTGCT GCGGCCCGAC GCCGTACATG ACGGCGGTCA AGCGCATGCT TGAAGCGGTC
GGCTTCGAAA TGAAGAATTA TCACGAGGAG TCGTTCGGCG CGACGCCGGC GGAAGCCAAA
GCCGACGCCG TGGAGCACGC CGAGCAGGCG GCCGATGCAC CTGAGCTGGA CGTTTCCGAC
CTCAATCTGG TGGAGTTCAT CGGCAGCGAG AAGAGCATCC GCGTTGCCCC GGGCGAGACC
GTGCATGCTG CGGCAGCCAA AGTTGGCCTG ATGATCCCCA AAGCTTGCGG CATGGGCATC
TGCGGCACCT GCAAGGTGCT CAAACTGGGC GGCGAAGTAG AAATGGAGCA CAACGGCGGC
ATTACCGAAG AGGATGAAGC CGAGGGCTAC ATCCTGTCGT GCTGCAGCGT GCCGAAAGGG
GATGTGCGGA TCGATTACTG A
 
Protein sequence
MSDTFLNPVT TQTWANGRHI VRCVKVIQET WDVRTFCFMA DQPIMFFFKP GQFVTLELEI 
EGKPVMRSYT ISSSPSVPYS FSITVKRVPG GLVSNFLHDT MHEGAELPVH GPVGLFNAID
FPAGKVLYLS GGVGITPVMS MARWFYDTNA NVDMVFVHSA RSPKDIIYHR ELEQMASRIP
NFSLHIICEK HGLGEPWAGY RGYLNQRLME LIAPDYMERV VFCCGPTPYM TAVKRMLEAV
GFEMKNYHEE SFGATPAEAK ADAVEHAEQA ADAPELDVSD LNLVEFIGSE KSIRVAPGET
VHAAAAKVGL MIPKACGMGI CGTCKVLKLG GEVEMEHNGG ITEEDEAEGY ILSCCSVPKG
DVRIDY