| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0298 |
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| Symbol | |
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| ID | 5191873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 341744 |
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| End bp | 342433 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584743 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001265655 |
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| Protein GI | 148545553 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0046472 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.109587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGG AAGTCATCTT CAAATGGCTG CCGCGCCTGG CCGAGGGTGC GGTCCTGACC
CTGGAGCTGG TAGCCATTGC CGTGGTTGCC GGTTTGATCC TGGCCATCCC GCTGGGCATC
GCCCGCTCCT CGCGCCACTG GTACGTGCGC GCGGTGCCGT TCAGCTATAT TTTCTTCTTC
CGTGGCACGC CGCTGCTGGT GCAGTTGTTC CTGGTCTATT ACGGCCTGGC GCAGTTCGAT
GCGGTGCGCT CCAGTTCGCT GTGGCCGTAC CTGCGCGATC CGTTCTGGTG CACGGTGCTG
ACCATGACCC TGCACACCGC TGCGTACATC GCCGAGATCC TGCGTGGCGC GCTGCAGGCG
ATCCCTAAAG GTGAGATTGA AGCGGCACGG GCGCTGGGCA TGTCGCGTGG CAAAACGCTG
TTCTACATCA TGCTGCCACG CGCTGCGCGC ATCGGCCTGC CGGCGTACAG CAACGAAGTG
ATCCTGATGC TCAAGGCCAG TGCCCTGGCC AGTACCGTGA CCCTGCTGGA ACTGACCGGC
ATGGCCCGTA CCATCATCGC CCGCACCTAC CTGCCGGTGG AGATCTTCTT CGCCGCAGGC
GTGTTCTACC TGGTGATCTC GTTCATGCTG GTGCAAGGCT TCAAGCTGCT GGAGCGCTGG
CTGCGTGTAG ATGCCTGCCA AGGGCGCTGA
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| Protein sequence | MNWEVIFKWL PRLAEGAVLT LELVAIAVVA GLILAIPLGI ARSSRHWYVR AVPFSYIFFF
RGTPLLVQLF LVYYGLAQFD AVRSSSLWPY LRDPFWCTVL TMTLHTAAYI AEILRGALQA
IPKGEIEAAR ALGMSRGKTL FYIMLPRAAR IGLPAYSNEV ILMLKASALA STVTLLELTG
MARTIIARTY LPVEIFFAAG VFYLVISFML VQGFKLLERW LRVDACQGR
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