| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0248 |
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| Symbol | |
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| ID | 5193554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 290376 |
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| End bp | 291347 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584693 |
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| Product | taurine ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001265606 |
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| Protein GI | 148545504 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4521] ABC-type taurine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01729] taurine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0698542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.239622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGC ACGCTCCGCT GCGCCTGTTC GCCGCCCTGA CCCTCGCCAG CACCAGCTGG
TTGGCCCAGG CAGCCGACCT GACAGTGGCC TACCAGACCA CTGTCGACCC GGCCAAAGTG
GCACAGGTCG ATGGCGACTA CGAAAAAGCC AGCAAGGCCA GCATCGACTG GCGCAAATTT
GATAACGGCG CAGACGTGAT CACTGCCGTG GCCAGCGGCG ACGTGCAGAT CGGCTACCTG
GGCTCCAGCC CGCTGGCCGC TGCCGCCACC CGCAAGCTGC CGGTTGAAAC CTTCCTCATC
GCCACCCAGA TTGGCGCGGG TGAAGCGTTG GTGGCCCGTG ACAGCATCAA GTCGCCGCAA
GACCTGATCG GCAAGAAGGT CGCCGTCCCG TTCGTGTCCA CCGGGCATTA CAGCCTGCTT
GCCGCACTGA AAAGCTGGAA TATCGACCCT TCCAAGGTAC AGATCCTCAA CCTGGCGCCG
CCGGCCATCA TTGCCGCCTG GAAGCGCGGC GACATCGATG CGACCTACGT GTGGGACCCG
GCCCTGGGCG TGGCCAAGGA AAACGGCAAG GTCCTGATCA CCTCCGGCGA ACTGGCCCAG
AAAGGCGCGC CTACCTTCGA TGCCTGGATC GTGCGCAAGG ACTTCGCCGA GAAACACCCT
GATGTGGTCA AGGCCTTTGC CAAAGTCACC CTCGATGCCT ACGCCGACTA CCGCAAGGAC
CCGAAAGCCT GGCTGGCCGA CAAGGGCAAC GTAGACAAGC TGGTGAAGCT GTCCGGTGCC
AAGGCCAGCG ACATCCCGGT GCTGCTGGAG GGCAACGTCT ACCCGCTGGC CGCTGACCAG
GCCAACGCCC TGGGCGCGCC GACCACCCAA GCGCTGACGG ACACCGCCAA CTTCCTCAAG
CAGCAAGGCA AAGTCGAAGC AGTGCTGCCG GACTACTCGC CGTACGTCAG CGCCAAGTTC
CTTCCAAACT GA
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| Protein sequence | MIPHAPLRLF AALTLASTSW LAQAADLTVA YQTTVDPAKV AQVDGDYEKA SKASIDWRKF
DNGADVITAV ASGDVQIGYL GSSPLAAAAT RKLPVETFLI ATQIGAGEAL VARDSIKSPQ
DLIGKKVAVP FVSTGHYSLL AALKSWNIDP SKVQILNLAP PAIIAAWKRG DIDATYVWDP
ALGVAKENGK VLITSGELAQ KGAPTFDAWI VRKDFAEKHP DVVKAFAKVT LDAYADYRKD
PKAWLADKGN VDKLVKLSGA KASDIPVLLE GNVYPLAADQ ANALGAPTTQ ALTDTANFLK
QQGKVEAVLP DYSPYVSAKF LPN
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