Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0226 |
Symbol | |
ID | 5194837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 263971 |
End bp | 265728 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640584671 |
Product | hypothetical protein |
Protein accession | YP_001265585 |
Protein GI | 148545483 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.767872 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGGCA AAGGAATGCG CACAACCATG CAGTTGAAAA AACTCACCGC CACCACCCTG CTGCTGGCCG GCATTGGCCT GTTCACCCAG CCTGCCCAAG CCAACCTCAC CCAGCAGCAG TCCGCAGCTA TCGTCAAAGC CTTCGACGGC AGCGACCCAA GCGATTTCAG GCAATTCCTC GGCAAGCTCA AAGGCAGCGC CCTGGGCAAG GCCGACAACC TCGAGGCAAC CGTCGACGCC TACCTGGCCA ACAAGCCATT GGCCGCCGAG CAACAAGACG AGATCAACCG CCTGCTCGGC CTGTATACCC GCATCAAGTA TGGCAAAGCC GCTACCGAAA CCCTGCGTGA ACTGGTAGCC ATCCCCACCT TCAACGTCGA GGGTACACCG CAGTACGAAA ACCCTGAATT CCTCAAGATC GCCGACAAGA TCAAGGCCTT GGCCGACCGC TTCGGCCTGG CCTTCCGCAA CATCGACAAC CGGGTGTACG AGATCTCGCT GGGCAGCGGG AAGGAAGTGA TCGGTATCCA TGCCCACGCT GACGTCGTGC CGGTCAACCC GGACAACTGG AAGCTGGCCG ACGGTACGCG CCTGGACCCG TTCAAGGTCA CCCTGGTGGG TGACCGCATG TACGGCCGCG GCACCGAAGA CGACAAGAAC GGCATCGTGG TGGCGATGTA TGCGCTGAAA GTGGCCAAGG ACGAAAACCT GCCGCTCGCC CGGCAGTTCA AGCTGCTGAT CGACACCACC GAAGAAACCA GCGGTGATGC CATCCCCTAC TACTTTGAGC GCAACCCTAC GCCCGATTAC AACCTGGCCC TCGACGGCGG CTACCCCGTA GTGATTGCCG AGAAAGGCTA CGGCACGGTC ATGGCCAGCT TCACCAAGCG CCCGGCCAGC GGCAAGGGTG CCGAGATCGT CAACCTGACC GGTGGCCTGG CCACCAACCA GATCCCGACA ACTTCGGTTG CGACCCTGAT TTCTGACAAC CCGGCACAGC TGGTCAAGCA CCTGCAGCAA GCCGGTGCCA GATATGTGAA GCAGCATGGA AGCGACTTCA GCATCGACGC CAAGGCCGAC GGCAAGCAAG TCTTGCTCAC CGTGACCGGT GTTTCCGCAC ACTCTTCGGA GCCGGAATCC GGCATCAACC CGGTGGCGCG TATGCTCGAC TTCATCAATG GCCTCGGCCA GCAGGTGTCG CTCAAGCACA ACCACTTTAC CGACGCGGCC CGCTACGCCG CCGAAAACTG GGGCCTGGAC TACCTGGGCA ACACGCTCGG CGTGGCCTTC AAGGACCCGT TCATGGGCCC GCTGACCACC TCGCTGACCT TTGTCGGGGT GGATGACAAA GGCTTGAAAC TGGCGGTGAA TCTGCGCATT CCCAAGGGGA AGCCGATCGC CACGATCAAG GACGAGCTGG CCGACAAACT GGGTAAATGG ACCCGGCAAA GCAACACCTC GGTGGCGTTC GATTACAGCC TGGACGAGCC GATGTACCGC AACCCTGAAG GCGAATGGGT AAAGGCCCTG CTCGCTGTGG CCACCGAGAA CCTGGGGATG AAGCATGAGT TCGGCACGTC CGCCGGTGCG ACTTCGGTCC ACGACCTGCC CAACGGCGTC CAGTTCGGCC TGGCCATGCC GGACGTGAAG TACACCGGGC ACAACGACAA CGAGTTCAAG ACCGTGGAGC AGTTCATGCT GGACTTGCAG GTGGTGAGCG AAATGGTGGC GCGGATCGGG CAGATGCCGA AGCTTTGA
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Protein sequence | MIGKGMRTTM QLKKLTATTL LLAGIGLFTQ PAQANLTQQQ SAAIVKAFDG SDPSDFRQFL GKLKGSALGK ADNLEATVDA YLANKPLAAE QQDEINRLLG LYTRIKYGKA ATETLRELVA IPTFNVEGTP QYENPEFLKI ADKIKALADR FGLAFRNIDN RVYEISLGSG KEVIGIHAHA DVVPVNPDNW KLADGTRLDP FKVTLVGDRM YGRGTEDDKN GIVVAMYALK VAKDENLPLA RQFKLLIDTT EETSGDAIPY YFERNPTPDY NLALDGGYPV VIAEKGYGTV MASFTKRPAS GKGAEIVNLT GGLATNQIPT TSVATLISDN PAQLVKHLQQ AGARYVKQHG SDFSIDAKAD GKQVLLTVTG VSAHSSEPES GINPVARMLD FINGLGQQVS LKHNHFTDAA RYAAENWGLD YLGNTLGVAF KDPFMGPLTT SLTFVGVDDK GLKLAVNLRI PKGKPIATIK DELADKLGKW TRQSNTSVAF DYSLDEPMYR NPEGEWVKAL LAVATENLGM KHEFGTSAGA TSVHDLPNGV QFGLAMPDVK YTGHNDNEFK TVEQFMLDLQ VVSEMVARIG QMPKL
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