Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0219 |
Symbol | |
ID | 5192123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 259005 |
End bp | 259637 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584664 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001265578 |
Protein GI | 148545476 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.581325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGG AAGTATGGTT AGGCTTCTTT GCCGCCTGCT GGGTGATCAG CCTTTCACCC GGTGCCGGGG CGATTGCCTC AATGTCCAGC GGCCTGCAAT ACGGCTTCTG GCGTGGTTAC TGGAACGCCC TGGGCCTGCA GCTGGGCCTG ATCATGCAGA TCGCCATCAT CGCCGCCGGC GTCGGTGCCG TCCTGGCCGC CTCGGCCACG GCGTTCCAGG TCATCAAGTG GTTTGGCGTC GCCTACCTTG TGTACCTGGC CTACAAGCAG TGGCGTGCCC TGCCGATGGA CATGAGCGAA GAATCAGGCG TGCGCCCGAT CGGCAAGCCG TTGAGCCTGG TGTTCCGTGG TTTTCTGGTC AACATCAGCA ACCCCAAGGC GCTGGTGTTC ATGCTGGCGG TGCTGCCGCA GTTTCTCAAT CCCCATGCAC CGCTGCTGCC GCAATATGTG GCGATCACCG TGACCATGGT GACGGTCGAC CTGCTGGTGA TGGCGGGGTA CACCGGGTTG GCTTCGCATG TGTTGCGCAT GTTGCGCACG CCCAAACAGC AAAAGCGTTT GAACCGCACC TTTGCCGGGT TGTTCATTGG TGCAGCCACC TTCCTCGCGA CCTTGCGCCG CGCGCCGGTC TGA
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Protein sequence | MSMEVWLGFF AACWVISLSP GAGAIASMSS GLQYGFWRGY WNALGLQLGL IMQIAIIAAG VGAVLAASAT AFQVIKWFGV AYLVYLAYKQ WRALPMDMSE ESGVRPIGKP LSLVFRGFLV NISNPKALVF MLAVLPQFLN PHAPLLPQYV AITVTMVTVD LLVMAGYTGL ASHVLRMLRT PKQQKRLNRT FAGLFIGAAT FLATLRRAPV
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