Gene Pput_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0206 
Symbol 
ID5192833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp245881 
End bp247380 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content63% 
IMG OID640584651 
Productargininosuccinate lyase 
Protein accessionYP_001265565 
Protein GI148545463 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTTT CCGGGCATTT CTCTCGACCG GCGCCCTGCG GCAGCCAGCC CAACCCTGCT 
ATCATCGACG CCACTTTTTC GTTCACGCCT GCAATGAGTG AATCCATGAG CACCGACAAG
ACCAATCAGT CCTGGGGCGG CCGCTTCAGT GAGCCCGTCG ACGCCTTCGT CGCCCGTTTC
ACCGCCTCGG TAGATTTCGA CAAGCGCCTG TACCGTCACG ACATCATGGG TTCGATTGCC
CATGCCACCA TGCTGGCGCA GGTCGGCGTG CTCAGTGATG CCGAGCGCGA CACCATCATC
GATGGCCTGA AAACCATCCA GGGCGAGATT GAAGCCGGCA ACTTCGACTG GCGTGTCGAC
CTTGAAGACG TGCACATGAA CATCGAAGCA CGCCTGACCG ACCGCATCGG CATCACCGGC
AAGAAGCTGC ACACCGGCCG TAGCCGCAAC GACCAGGTGG CCACCGACAT CCGCCTTTGG
CTGCGCGACG AAATCGACCT GATCCTGGGC GAAATCACCC GCCTGCAGCA GGGCCTGCTG
GAGCAGGCAG AGCGTGAAGC CGAAACCATC ATGCCTGGTT TCACCCACCT GCAGACGGCG
CAGCCGGTCA CCTTTGGCCA CCACCTGCTG GCGTGGTTCG AAATGCTCAG CCGCGACTAT
GAGCGCCTGG TCGACTGCCG CAAGCGCACC AATCGCATGC CACTGGGCAG CGCCGCGCTG
GCCGGCACCA CCTACCCGAT CGACCGTGAA CTGACCTGCA AGCTGCTGGG CTTTGAAGCC
GTGGCCGGCA ACTCGCTGGA TGGCGTGTCG GACCGTGATT TCGCCATCGA ATTCTGCGCC
GCTGCCAGCG TGGCGATGAT GCACCTTTCG CGCTTCTCCG AAGAGCTGGT GCTGTGGACG
AGCGCGCAGT TCCAGTTCAT CGACCTTCCG GACCGCTTCT GCACCGGCAG CTCGATCATG
CCGCAGAAAA AGAACCCGGA CGTGCCAGAG CTGGTACGCG GCAAGAGCGG CCGTGTGTTC
GGCGCCCTGA CCGGCCTGCT GACCCTGATG AAAGGCCAAC CACTGGCCTA CAACAAGGAC
AACCAGGAAG ACAAGGAACC GCTGTTCGAC GCCGCCGATA CCCTGCGCGA CTCGCTGCGG
GCCTTCGCTG ACATGATCCC GGCGATCAAG CCCAAGCACG CCATCATGCG TGAAGCGGCC
CTGCGCGGCT TTTCCACCGC GACCGACCTG GCCGACTACC TGGTTCGCCG TGGCCTGCCA
TTCCGTGACT GTCACGAGAT CGTTGGCCAC GCGGTGAAGT ATGGTGTGGA CACTGGCAAG
GACCTGGCCG AGATGAGCCT GGACGAACTG CGCCAGTTCA GCGACCAGAT CGAACAGGAC
GTGTTTGCCG TGCTGACGCT GGAAGGTTCG GTGAATGCGC GCGACCACAT TGGTGGTACG
GCGCCGGCGC AGGTGCGTGC TGCCGTTGTT CGTGGCAAGG CCCTGTTGGC GTCTCGCTAA
 
Protein sequence
MRFSGHFSRP APCGSQPNPA IIDATFSFTP AMSESMSTDK TNQSWGGRFS EPVDAFVARF 
TASVDFDKRL YRHDIMGSIA HATMLAQVGV LSDAERDTII DGLKTIQGEI EAGNFDWRVD
LEDVHMNIEA RLTDRIGITG KKLHTGRSRN DQVATDIRLW LRDEIDLILG EITRLQQGLL
EQAEREAETI MPGFTHLQTA QPVTFGHHLL AWFEMLSRDY ERLVDCRKRT NRMPLGSAAL
AGTTYPIDRE LTCKLLGFEA VAGNSLDGVS DRDFAIEFCA AASVAMMHLS RFSEELVLWT
SAQFQFIDLP DRFCTGSSIM PQKKNPDVPE LVRGKSGRVF GALTGLLTLM KGQPLAYNKD
NQEDKEPLFD AADTLRDSLR AFADMIPAIK PKHAIMREAA LRGFSTATDL ADYLVRRGLP
FRDCHEIVGH AVKYGVDTGK DLAEMSLDEL RQFSDQIEQD VFAVLTLEGS VNARDHIGGT
APAQVRAAVV RGKALLASR