Gene Pput_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0196 
Symbol 
ID5191109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp236174 
End bp236626 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID640584641 
ProductMarR family transcriptional regulator 
Protein accessionYP_001265555 
Protein GI148545453 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.149236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTG ATTTCCTGCG CCTGCAAGTC AGCAGTGGCC TGGTAGTTGC TGCCCGCCAC 
TGGCGGCGCA TCTGTCATAC CGCCTTGACC GGCTACGGCA TTTCCGAGGC CTGCGCTGCG
CCGTTGCTGA TGATCGTGCG CCTGGGCGAC GGCGTGCACC AGGTGGCTGT GGCCCAGGCC
GCTGGCCTGG AAAGCCCGTC GCTGGTACGC CTGCTTGACC AACTGTGCAA AGCTGGCCTG
GTGTGCCGCA GCGAGGACCC ACTGGATCGC CGCGCCAAGG CACTGAGCCT GACTGCCGAA
GGCCGTGCCC TGGCCGAAGC CATTGAAGCC GAACTGGTGC GCTTGCGCCG CGATGTGCTC
GGCGGTATCG ATCAGGCCGA CCTGGAAGCT GCCTTGCGTG TGCTTCGTGC CTTCGAGGCT
GCCGGTCTGG GCAGCGCAGG CGGGGTGGCA TGA
 
Protein sequence
MSLDFLRLQV SSGLVVAARH WRRICHTALT GYGISEACAA PLLMIVRLGD GVHQVAVAQA 
AGLESPSLVR LLDQLCKAGL VCRSEDPLDR RAKALSLTAE GRALAEAIEA ELVRLRRDVL
GGIDQADLEA ALRVLRAFEA AGLGSAGGVA