Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0192 |
Symbol | |
ID | 5191116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 232545 |
End bp | 233408 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584637 |
Product | ABC transporter related |
Protein accession | YP_001265551 |
Protein GI | 148545449 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCC CATTGCCAGG CCACACGGCC AGCAACCTGA GCCGTGTTGC AGCGCCGCCT TTGCTCAAGG TGGATAACCT CAGCCTCGAA TACCGTACCG CGCAACGCGT GGTGCGGGCC ACCCATCAGG TCAGCTTCGA AGTCGACCGC ACTGATCGTT TTGTACTGCT CGGCCCCTCC GGCTGTGGCA AGTCCACCCT GCTCAAAGCC GTGGCCGGTT TTATCCAGCC GCAAGAAGGC CAGATTCTGC TGCAGGGCCA GACAGTTCGT GGCCCAGGCC CCGACCGCAT CGTGGTGTTC CAGGAGTTTG ACCAGTTGCC GCCGTGGAAA ACGGTGAAGC AGAACGTCAT CTTTCCGCTG CTGGTGTCTG GCCAACTCAA GCGTGCGGAG GCGGAGGAGC GGGCGCTGCA TTATCTGGAG AAGGTCGGTC TGGCCGCCTT TGCCGATGCT TATCCACACA CGTTGTCCGG TGGTATGAAG GCACGTGTGG CAATTGCCCG GGCCTTGGCC ACCCAGCCCA AGATCCTGTT GATGGATGAG CCGTTCGCCG CCCTGGATGC GCTGACCCGG CGCAAGATGC AGGAAGAGCT GTTGCTGCTG TGGGAGGAAG TGCGGTTCAC CCTGTTGTTC GTCACCCACT CCATCGAAGA AGCGCTGGTG GTCGGCAACC GCATCCTGTT GTTGTCGCCC CACCCGGGGC GGGTGCGCGC CGAAGTGCAC AGCCATCAAT ACGGCCTGGG CAGCCTGGGT GGCAGCGACT TCCAGGCCAG TGCCCGGCGT ATCCACCGTT TGCTGTTCGA TGAAGCCGAT ATCCCGGAAC AGCCTGACAA CCTTGGGTTC AACGATATTC GTATCGCCTA CTGA
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Protein sequence | MTAPLPGHTA SNLSRVAAPP LLKVDNLSLE YRTAQRVVRA THQVSFEVDR TDRFVLLGPS GCGKSTLLKA VAGFIQPQEG QILLQGQTVR GPGPDRIVVF QEFDQLPPWK TVKQNVIFPL LVSGQLKRAE AEERALHYLE KVGLAAFADA YPHTLSGGMK ARVAIARALA TQPKILLMDE PFAALDALTR RKMQEELLLL WEEVRFTLLF VTHSIEEALV VGNRILLLSP HPGRVRAEVH SHQYGLGSLG GSDFQASARR IHRLLFDEAD IPEQPDNLGF NDIRIAY
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