| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0181 |
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| Symbol | |
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| ID | 5191941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 193925 |
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| End bp | 194446 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584626 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001265540 |
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| Protein GI | 148545438 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.252415 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCGC CCTCCTCCAT GCCCAGCAAC GATTCCGTGC AAACGCTCTA CAGTGACCAC
CACGGCTGGT TGCATACCTG GCTGCGTAGC AAGCTCGGCA ACGCAGCCGA TGCGGCTGAC
CTCGCCCAAG ATACCTTCGT CCGCTTGCTA CAGCGTCGTG AACAATTGCA GCTGAATGCT
CCCAGGGCCT TCCTGCGCAC GGTAGCGCGT GGGTTGGTGA TCGATCATTG GCGCCGCGAG
GAACTGCACA GGGCCTACCT GGAGGCTTTG GCCCATGTGC CGGAAGCACT GGCCCCCTCA
GTCGAGACCC GCGAGCTGCT GCTGGAATTG CTTGAGCGTA TTGCACGCAT GCTCGACGGC
CTCAAACCCA AGGTCCGTCG CGCATTCCTG CTGGCTCAAT GCGAGGGGCT GAAGCATCAG
GCCATCGCCG AACAGATGGG GATCTCCGTG CGCACCGTTG AGCGCTATAT CGCCGATGCG
CTCTATCACT GCTACGTGCT GCGCTATGAA GACGACTGCT GA
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| Protein sequence | MPAPSSMPSN DSVQTLYSDH HGWLHTWLRS KLGNAADAAD LAQDTFVRLL QRREQLQLNA
PRAFLRTVAR GLVIDHWRRE ELHRAYLEAL AHVPEALAPS VETRELLLEL LERIARMLDG
LKPKVRRAFL LAQCEGLKHQ AIAEQMGISV RTVERYIADA LYHCYVLRYE DDC
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