Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0177 |
Symbol | |
ID | 5193726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 182152 |
End bp | 183333 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640584618 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001265536 |
Protein GI | 148545434 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00130576 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.936713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTA AAGCAAGCTT CAACTGGATC GACCCGTTGC TGCTGGATCA GCAGCTCACT GAAGAAGAGC GCATGGTGCG TGACAGCGCT TATCAGTTCG CCCAGGACAA GCTGGCCCCG CGTGTGCTTG AGGCCTTCCG CCATGAGCAG ACCGATCCGG CGATCTTCCG CGAGATGGGT GAAGTCGGCC TGTTGGGTGC AACCATTCCC GAGCAATACG GTGGCAGTGG CCTGAATTAT GTGTGCTATG GCCTTATTGC TCGCGAAGTG GAGCGTATCG ACTCAGGTTA CCGCTCGATG ATGAGTGTGC AGTCGTCACT GGTGATGGTG CCGATCAACG AATTTGGCAC CGAAGCTCAA AAGCAGAAGT ACCTCCCCAA GCTGGCCAGT GGCGAGTGGA TCGGTTGCTT CGGTCTGACC GAGCCTAACC ATGGCTCCGA TCCTGGTTCG ATGATTACGC GCGCGAGGAA GGTCGACGGT GGCTACCGGC TGACCGGCAG TAAAATGTGG ATCACCAACA GTCCTATCGC CGATGTGTTC GTGGTGTGGG CCAAGGATGA TGCGGGCGAT ATTCGTGGCT TCGTACTGGA AAAAGGCTGG CAAGGCCTCA GTGCCCCGGC AATCCATGGC AAGGTTGGCC TGCGCGCGTC GATCACTGGT GAAATCGTCA TGGACAATGT GTTCGTGCCA GAAGAGAACA TCTTCCCGGA CGTGCGTGGC CTCAAGGGCC CGTTCACCTG CCTGAACTCG GCTCGCTATG GTATTTCTTG GGGGGCGCTG GGTGCCGCTG AAGCCTGCTG GCACACCGCT CGCCAGTACA CCCTGGACCG TCAGCAGTTT GGTCGTCCAC TGGCCGCCAA CCAGTTGATT CAGAAGAAGC TTGCCGACAT GCAGACAGAA ATCACCCTGG CGCTGCAGGG CTGCCTGCGT CTGGGGCGCA TGAAGGATGA AGGGACGGCT GCGGTGGAAA TCACCTCCAT CATGAAGCGC AATTCCTGCG GCAAGGCGCT GGATATCGCC CGTATGGCGC GTGACATGCT GGGTGGCAAC GGCATCTCCG ACGAGTTTGG TGTGGCCCGC CATCTGGTTA ACCTGGAGGT GGTCAACACC TATGAAGGTA CCCATGATGT GCATGCACTT ATCCTGGGGC GTGCGCAAAC CGGTATCCAG GCGTTCTATT GA
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Protein sequence | MAGKASFNWI DPLLLDQQLT EEERMVRDSA YQFAQDKLAP RVLEAFRHEQ TDPAIFREMG EVGLLGATIP EQYGGSGLNY VCYGLIAREV ERIDSGYRSM MSVQSSLVMV PINEFGTEAQ KQKYLPKLAS GEWIGCFGLT EPNHGSDPGS MITRARKVDG GYRLTGSKMW ITNSPIADVF VVWAKDDAGD IRGFVLEKGW QGLSAPAIHG KVGLRASITG EIVMDNVFVP EENIFPDVRG LKGPFTCLNS ARYGISWGAL GAAEACWHTA RQYTLDRQQF GRPLAANQLI QKKLADMQTE ITLALQGCLR LGRMKDEGTA AVEITSIMKR NSCGKALDIA RMARDMLGGN GISDEFGVAR HLVNLEVVNT YEGTHDVHAL ILGRAQTGIQ AFY
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