Gene Pput_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0096 
Symbol 
ID5193103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp102713 
End bp103045 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content63% 
IMG OID640584537 
ProductDOPA 4,5-dioxygenase 
Protein accessionYP_001265455 
Protein GI148545353 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3805] Aromatic ring-cleaving dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAGGA TCAAGGGTTA CCACGCCCAC GTTTATTACG ACGCAGCCAC CATGGAGCAG 
GCCCGGGAAC TGTGCGAGGA GGCGGCGCGG CTGTTCCCCG TGACCATGGG GCGCATGCAC
CAGAAACCGG TTGGGCCGCA TCCGGACTGG AGTTGCCAGC TGGCGTTCGG GCCCGAAGTG
GTGGGGGTGG TATTGCCTTG GTTGGCGCTG TACCGCAAGG GCCTGGTGGT ATTCATGCAT
CCGGAAACCG GGGATGAACT GGCGGATCAC CGGGATCATG CGATCTGGAT GGGGGCCGTG
CGGCCCTTGA ATCTGTCGAT TTTTGGGGGC TAG
 
Protein sequence
MQRIKGYHAH VYYDAATMEQ ARELCEEAAR LFPVTMGRMH QKPVGPHPDW SCQLAFGPEV 
VGVVLPWLAL YRKGLVVFMH PETGDELADH RDHAIWMGAV RPLNLSIFGG