| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0078 |
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| Symbol | |
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| ID | 5190903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 84910 |
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| End bp | 85461 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584519 |
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| Product | DNA-3-methyladenine glycosylase I |
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| Protein accession | YP_001265437 |
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| Protein GI | 148545335 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
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| TIGRFAM ID | [TIGR00624] DNA-3-methyladenine glycosylase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0348853 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0800012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCT GCTTTTGGTG TACCGACGAT CCGTTATACC AGGCCTACCA CGACCAGGAA
TGGGGGATGC CACAGCGCGA CCCGGCGTTG CTCTTCGAGA TGCTTTTGCT CGAAGGGTTC
CAGGCAGGGC TTTCATGGAT TACCGTTTTG CGCAAACGCG AGCGTTATCG CCAGGTGATG
TACGGCTTCG ACCCCGTGAG GCTGGCGGCC ATGGGCGACG AACGCATCGA AGAATTGATG
CAGGATGCAG GCATCATCCG CAATCGCCTC AAGCTCAAGG CTGCGCGGCG CAACGCCCAG
GCCTGGCTGG CTGTGGATAA CCCTGCCGAA TGGCTGTGGT CGTTCGTCGG CGGCTCGCCG
AAGATCAACC ACTTCAAGGC GCGCGGCGAC GTGCCAGCTG TTACCGATGA AGCCAAGGCA
ATGAGCAAGG CCTTGCAGAA AGCTGGCTTC ACGTTCGTCG GTCCGACCAT CTGCTACGCC
TTCATGCAGG CCACCGGCAT GGTCATGGAC CACACCACCG ACTGCGATCG CTACGCCGCC
TTGTTGCGCT GA
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| Protein sequence | MPRCFWCTDD PLYQAYHDQE WGMPQRDPAL LFEMLLLEGF QAGLSWITVL RKRERYRQVM
YGFDPVRLAA MGDERIEELM QDAGIIRNRL KLKAARRNAQ AWLAVDNPAE WLWSFVGGSP
KINHFKARGD VPAVTDEAKA MSKALQKAGF TFVGPTICYA FMQATGMVMD HTTDCDRYAA
LLR
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