| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0003 |
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| Symbol | recF |
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| ID | 5192242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3062 |
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| End bp | 4165 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640584446 |
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| Product | recombination protein F |
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| Protein accession | YP_001265364 |
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| Protein GI | 148545262 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.113705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.121048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTTC GACGTATCAT GGTCACCGCG GTGCGCAACT TGCACCCGGT GACACTCTTA
CCCTCCCCCC GCATCAACAT CCTTTACGGC TCCAACGGCA GCGGCAAGAC CAGCGTGCTA
GAAGCCGTGC ATTTGCTCGG GCTGGCCCGT TCATTTCGCA GCACCCGCCT GAATCCGGTT
ATTCAGTACG AACAGGCTGC CTGTACTGTG TTCGGCGAGG TTCAGCTGAC GGAGGGTGGT
ACGAGTAACC TGGGTGTGTC CCGTGAGCGA CAAGGGGAGT TTACTATCCG CATCGATGGG
CAGAATGCGC GCAGCGCCGC GCAATTGGCT GAGTTACTGC CGCTTCAGCT CATCAACCCA
GACAGTTTCC GGCTGCTTGA AGGCGCCCCA AAAATACGCC GCCAGTTTCT GGACTGGGGG
GTGTTCCACG TGGAACCTCG TTTTCTGCCA GCCTGGCAAC GCCTTCAGAA GGCGCTGCGG
CAGCGGAACT CATGGTTGCG TCATGGTACA CTTGACCCAG CTTCGCAAGC CGCCTGGGAC
CGGGAATTGT GCCTGGCTAG CGCGGAAATA GATGAATACC GTCGCAACTA CATCAAGGCC
TTGAAGCCCG TCTTCGAGCG AACCCTGAGC GAACTGGTCG AGCTGGACGG GTTGACCCTA
AGCTACTATC GAGGCTGGGA CAAGGACCGG GAACTGCAAG AAGTGCTCGC CTCCTCCCTC
CTTCGCGATC AGCAGATGGG CCATACCCAA GCCGGTCCGC AGCGTGCTGA TCTGCGTTTG
CGGTTGGCTG GCAATAACGC AGCCGACATC CTGTCGCGTG GTCAGCAAAA GTTGGTGGTA
TGCGCATTGC GCATTGCCCA AGGCCACCTC GTTAGTCAGG CTCGCCGCGG TCACTGTATT
TATCTCGTGG ATGACTTGCC GTCCGAACTG GATGACCAGC ATCGCCGCGC ACTGTGCCGC
TTGCTTGAAG AATTACGCTG CCAGGTGTTC ATCACCTGTG TAGATCACGA ATTACTGAGG
GAAGGCTGGC AGACGGAAAC GCCAGTTGCT TTGTTCCACG TGGAACAAGG CCGTATCACC
CAGACCCACG ACCATCGGGA GTGA
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| Protein sequence | MSLRRIMVTA VRNLHPVTLL PSPRINILYG SNGSGKTSVL EAVHLLGLAR SFRSTRLNPV
IQYEQAACTV FGEVQLTEGG TSNLGVSRER QGEFTIRIDG QNARSAAQLA ELLPLQLINP
DSFRLLEGAP KIRRQFLDWG VFHVEPRFLP AWQRLQKALR QRNSWLRHGT LDPASQAAWD
RELCLASAEI DEYRRNYIKA LKPVFERTLS ELVELDGLTL SYYRGWDKDR ELQEVLASSL
LRDQQMGHTQ AGPQRADLRL RLAGNNAADI LSRGQQKLVV CALRIAQGHL VSQARRGHCI
YLVDDLPSEL DDQHRRALCR LLEELRCQVF ITCVDHELLR EGWQTETPVA LFHVEQGRIT
QTHDHRE
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