Gene PputW619_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5197 
Symbol 
ID6114199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5755714 
End bp5756490 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content61% 
IMG OID641625020 
ProductDeoR family transcriptional regulator 
Protein accessionYP_001752041 
Protein GI170724353 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.342459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAC GAAACACCCC CCAGCGCCGT CACAACATCC TGGCCATGCT CAGCGAGCAA 
GGTGAGGTCA GTGTGGACGC ATTGGCCAAG CGCTTTGAAA CGTCGGAAGT CACCATACGC
AAGGACCTCG CGGCCCTTGA GGCCAATGGC TTGCTTCTGC GTCGCTACGG CGGCGCCGTA
CCGGTTCCGC AGGAGATGCT TGGGGAAGCC GCACAGCCGG TGTCTGCCTA TAAGAAAGCC
ATCGCCCGTG CTGCTGTCGG CCGCATACGT GAACATGCCC GCATCATCAT CGACAGTGGC
AGCACTACCG CCGCCATGAT CCCCGAGCTC GGCCGCCAGC CAGGCCTGGT GGTGATGACC
AACTCTTTGA ACGTGGCCCG CGCCATTAGC GAGCTTGAGC ATGAACCCGT ACTGCTGATG
ACCGGCGGCA CCTGGGACCC GCACTCCGAG TCGTTCCAAG GCCAGGTCGC TGAGCAGGTA
CTGCGTTCAT ACGATTTCGA CCAACTGTTC ATCGGCGCCG ATGGCATCGA CCTCAACCGC
GGCACCACGA CTTTCAATGA GCTGCTGGGC CTGAGCCGAG TCATGGCTGA GGTGGCCCGC
GAGGTGATCG TGATGGTCGA ATCCGACAAG GTCGGGCGCA AGATCCCCAA TCTTGAGCTG
CCCTGGGGCA GTGTCAGCAC CCTCATTACA GACGAACGCC TGCCAGCAGC GGCACGCGAA
CAAATTCAAG CCCGCGGCGT CAACCTGATC TGCGCCGCGA TCAGCCAGGA GAAATAA
 
Protein sequence
MSKRNTPQRR HNILAMLSEQ GEVSVDALAK RFETSEVTIR KDLAALEANG LLLRRYGGAV 
PVPQEMLGEA AQPVSAYKKA IARAAVGRIR EHARIIIDSG STTAAMIPEL GRQPGLVVMT
NSLNVARAIS ELEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLNR
GTTTFNELLG LSRVMAEVAR EVIVMVESDK VGRKIPNLEL PWGSVSTLIT DERLPAAARE
QIQARGVNLI CAAISQEK