Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5197 |
Symbol | |
ID | 6114199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5755714 |
End bp | 5756490 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641625020 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001752041 |
Protein GI | 170724353 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.342459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC GAAACACCCC CCAGCGCCGT CACAACATCC TGGCCATGCT CAGCGAGCAA GGTGAGGTCA GTGTGGACGC ATTGGCCAAG CGCTTTGAAA CGTCGGAAGT CACCATACGC AAGGACCTCG CGGCCCTTGA GGCCAATGGC TTGCTTCTGC GTCGCTACGG CGGCGCCGTA CCGGTTCCGC AGGAGATGCT TGGGGAAGCC GCACAGCCGG TGTCTGCCTA TAAGAAAGCC ATCGCCCGTG CTGCTGTCGG CCGCATACGT GAACATGCCC GCATCATCAT CGACAGTGGC AGCACTACCG CCGCCATGAT CCCCGAGCTC GGCCGCCAGC CAGGCCTGGT GGTGATGACC AACTCTTTGA ACGTGGCCCG CGCCATTAGC GAGCTTGAGC ATGAACCCGT ACTGCTGATG ACCGGCGGCA CCTGGGACCC GCACTCCGAG TCGTTCCAAG GCCAGGTCGC TGAGCAGGTA CTGCGTTCAT ACGATTTCGA CCAACTGTTC ATCGGCGCCG ATGGCATCGA CCTCAACCGC GGCACCACGA CTTTCAATGA GCTGCTGGGC CTGAGCCGAG TCATGGCTGA GGTGGCCCGC GAGGTGATCG TGATGGTCGA ATCCGACAAG GTCGGGCGCA AGATCCCCAA TCTTGAGCTG CCCTGGGGCA GTGTCAGCAC CCTCATTACA GACGAACGCC TGCCAGCAGC GGCACGCGAA CAAATTCAAG CCCGCGGCGT CAACCTGATC TGCGCCGCGA TCAGCCAGGA GAAATAA
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Protein sequence | MSKRNTPQRR HNILAMLSEQ GEVSVDALAK RFETSEVTIR KDLAALEANG LLLRRYGGAV PVPQEMLGEA AQPVSAYKKA IARAAVGRIR EHARIIIDSG STTAAMIPEL GRQPGLVVMT NSLNVARAIS ELEHEPVLLM TGGTWDPHSE SFQGQVAEQV LRSYDFDQLF IGADGIDLNR GTTTFNELLG LSRVMAEVAR EVIVMVESDK VGRKIPNLEL PWGSVSTLIT DERLPAAARE QIQARGVNLI CAAISQEK
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