Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5183 |
Symbol | |
ID | 6114185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5741564 |
End bp | 5742346 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641625007 |
Product | hypothetical protein |
Protein accession | YP_001752028 |
Protein GI | 170724340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.488725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAAA CAATTACAAC GCTGCTTGGG GCCGGTGCTG TCGGAAGTGC TGCGGTATTG GGCACAGCCT ATTTCGGTCT GGTGAATGTC GGCGCTGATG ATCCTCACTT CCCGGCAGTC CATTCCTTTC TCGCCATGGC TCGTGATCGG TCTATTGAGG TTCGAGCGCG AGACATCGAA GTCCCTGATC TGAAGGAAGC CGCGTTGATC AAAGCGGGGG CGGGCAACTA CAACGCCATG TGTATAGGCT GTCACCTTGC CCCTGGCGTT GGGAAGACTG AGCTAAGCCA AGCGCTATAC CCGTCGCCAC CCGACCTCAC CAAGGTGGGT GTCGGAGGCG ATCCAGCCGC CGCATTCTGG ACAATCAAGC ACGGTATCAA AGCCACGGGC ATGCCCGCCT GGGGCAAGAG CATGGGCGAT GAGTACATCT GGGGAATCGT CGCGTTCCTG GATCAACTGC CCCAGATGAA TGCCGAGCAG TACAAGGCCT TGGTGGCCAC GAGCGGCGGC CACCAGCACG GCGGCGGTGA AAGCGATATG CACAACCATG AGGGCCAGCA CGGCGGGAGC GGTCGTGCCG AGCATGGTGA TCACGATGAA GCGGCAGACG ACGATCATGC CCAGGCAGCT CACGACCATG GAGCTGCACC CGCAGGCTCC GCTCAAGCGG CAGATCATCA CGGTGACCAC AATGCGGCCG AGGCCCATTC GGATGCCCAC CCGACATCGT CGCCAAAGAC GCATGTTCAC AAAGACGGTA AGGAGCACAC TCATGCCAAC TAA
|
Protein sequence | MKKTITTLLG AGAVGSAAVL GTAYFGLVNV GADDPHFPAV HSFLAMARDR SIEVRARDIE VPDLKEAALI KAGAGNYNAM CIGCHLAPGV GKTELSQALY PSPPDLTKVG VGGDPAAAFW TIKHGIKATG MPAWGKSMGD EYIWGIVAFL DQLPQMNAEQ YKALVATSGG HQHGGGESDM HNHEGQHGGS GRAEHGDHDE AADDDHAQAA HDHGAAPAGS AQAADHHGDH NAAEAHSDAH PTSSPKTHVH KDGKEHTHAN
|
| |