| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5178 |
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| Symbol | |
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| ID | 6114180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5737062 |
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| End bp | 5737739 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641625002 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001752023 |
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| Protein GI | 170724335 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.341313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTAC TCGTAGCCGA AGATGAGCCG AAAACCGGTG TCTACCTCCA GCAAGGCCTA
ACAGAGGCTG GCTTCACTGT AGACCGGGTG ATGACAGGCA CTGACGCCCT GCAACAGGCG
CAGAGCGAAG CGTATGACTT GCTGATCTTG GACGTAATGA TGCCGGGGCT CGATGGCTGG
GAGGTCCTGC GCAAGATCCG GGCAGCGGGG AAAGACGTGC CGGTCCTCTT TCTCACGGCC
CGTGATGGCG TAGATGATCG CGTTAAAGGC TTGGAGCTGG GTGCTGATGA CTACCTTGTG
AAGCCCTTTG CGTTCTCTGA GCTGTTGGCT CGGGTCCGCA CACTGCTGCG CAGAGGCAAC
GGTGGTTCTG CTCAAACCAC CATGAAGATG GCGGACCTTG AGGTTGACCT GCTCAAGCGC
CGGGCTACGC GAAACGGCAA GCGGATCGAC CTTACTGCCA AGGAGTTTGC CCTTTTGGAG
CTGCTCATGC GCCGACGCGG GGAGGTGCTC CCCAAGTCGC TGATCGCTTC TCAGGTCTGG
GACATGAACT TCGACAGTGA CACCAACGTG ATCGAGGTCG CGATTCGCCG ACTGCGGGCC
AAGATTGATG ACGACTTCGC GCCAAAGCTC ATCCATACCG CCCGAGGCAT GGGCTACATG
ATGGATGTGG CAGAGTGA
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| Protein sequence | MKLLVAEDEP KTGVYLQQGL TEAGFTVDRV MTGTDALQQA QSEAYDLLIL DVMMPGLDGW
EVLRKIRAAG KDVPVLFLTA RDGVDDRVKG LELGADDYLV KPFAFSELLA RVRTLLRRGN
GGSAQTTMKM ADLEVDLLKR RATRNGKRID LTAKEFALLE LLMRRRGEVL PKSLIASQVW
DMNFDSDTNV IEVAIRRLRA KIDDDFAPKL IHTARGMGYM MDVAE
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