| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5061 |
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| Symbol | |
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| ID | 6114054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5602348 |
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| End bp | 5603685 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641624876 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001751906 |
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| Protein GI | 170724218 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.447957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCGT CACTGTTTAC CGCTCTTCCA TTCGCCTTTG CCGCCACTTT CCTACAAGCA
CAAACCTTGC CCGAAGCCAT GCAGAAAGCC CTTGAGGTGC ACCCGGAGAT CCAGGCGGGT
GTCAACGCCC GGGTGGCTGC CGATTACCAG CTGCGTGCGG CCAAGGGCGG CTATTTGCCG
CGGGTAGACG TGACCGCTGG TTATGGACGT GAGGGGACTG ACAGCCCGAG CACCGGCAAC
CGCTGGGAAA GCCTCAATCG CGGTGAGTCA GCAATCCGTC TTCGCCAAAT GGTTTTTGAC
GGTTTTGCCA CTTCTAGCGA AGTAGGCCGT CAACAAGCCA CCGTTAATGC CCGCGCCTAC
TCGCTGATGG ACACCTCGGA GCGTACCGCG CTTGACGTGG CCCAGGTTTA CCTGGACGTG
CTGTCGCGCC GCGAAATGGT CCGCCTCGCC GAGGAAAACC TGCGCAACCA CGAACGTATC
CTCGACCAGA TCAAACTGCG TACCAGCCGT GGTGTTGGCC GCCTGGCTGA CCTTGATCAG
GCCGAAGCCC GTCTGGCTCA AGCGCGCAAT AATTTGATAA CCGAGCAGAC CAACCTCGCC
GATGCCAACA CCAACTTCCT AAGCGTGGTA GGCCAGATGC CGGATGAACT GAGCGCCCCG
GCGCCTTTCA TCGACCTGCT GCCGGCAACT CTGGATGAGG CGCGCGCGCA GATGGTAGAG
AGCAGCCCAG TACTGCGCTC GGCAGAGTCG GACATCACCG CGGCAGAGAA ACAGTACGAC
GCTGCGAAGT CGAGCTTCTA TCCGCGGTTC GATGCAGAAC TCGGAAGAAC GGCCGATAAC
AACATCGACG GCACTGTCGG CCACAACAAT GAGTGGCAGG CCATGCTGCG CATGAACTTC
AACCTGTACG CCGGCGGCAG CAACAAGGCT GACCTGGAGT CCAAGTCATA CTTGGCCAAC
CAGGCGCTGG ATATTCGCAA TAACGCCCTG CGCCAGCTCA ACGAAGAACT GGGCCTGGCA
TGGAATGCGC AAGAGAACGC CAACGCCCAG TTGCCTATCG CCCAGCAATA CGTCGATCAC
AGCAACCGGG TACGCAGCGC TTACCAGCAG CAGTTCAGCC TCGGCGAACG CACACTGCTC
GACTTGCTCG ACAGTGAAAA TGAAACCTTC ACTGCTCAGC GCCGTCTGGT TGAGGTGAAG
AACATACAAT TGTTTACTCA ATACCGAATC AAGGCGACCA TTGGCCAACT GCTCAAGAGC
CAGGGTGTCG TAGCACCGAT GGCCACCGTT GTGCAGAATG ATGTGAAACC GCGAGTGAAC
CTGCCAGGCA TGAACTGA
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| Protein sequence | MRASLFTALP FAFAATFLQA QTLPEAMQKA LEVHPEIQAG VNARVAADYQ LRAAKGGYLP
RVDVTAGYGR EGTDSPSTGN RWESLNRGES AIRLRQMVFD GFATSSEVGR QQATVNARAY
SLMDTSERTA LDVAQVYLDV LSRREMVRLA EENLRNHERI LDQIKLRTSR GVGRLADLDQ
AEARLAQARN NLITEQTNLA DANTNFLSVV GQMPDELSAP APFIDLLPAT LDEARAQMVE
SSPVLRSAES DITAAEKQYD AAKSSFYPRF DAELGRTADN NIDGTVGHNN EWQAMLRMNF
NLYAGGSNKA DLESKSYLAN QALDIRNNAL RQLNEELGLA WNAQENANAQ LPIAQQYVDH
SNRVRSAYQQ QFSLGERTLL DLLDSENETF TAQRRLVEVK NIQLFTQYRI KATIGQLLKS
QGVVAPMATV VQNDVKPRVN LPGMN
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