| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5049 |
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| Symbol | |
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| ID | 6114042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5574415 |
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| End bp | 5575290 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641624864 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001751894 |
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| Protein GI | 170724206 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.383553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CTTTGCTGAC CCTGGGCCGT GTGGTCCTGA CCTTGCTGGT AGTGACCTTC
GCCGCCGTGC TCGTGTGGCA GATGGTGGTG TACTACATGT TCGCCCCCTG GACCCGCGAC
GGCCACATCC GCGCCGACGT GATCCAGATC GCCCCGGATG TTTCCGGGTT GATCCAGAAG
GTCGAAGTGC GTGACAACCA GACCGTCAAG CGCGGCGACG TGCTGTTCAC CATCGACCAG
GACCGCTTCA CCCTGGCGCT GCGCCAGGCC AAGGCGACCC TTGGCGAACG CCAGGAAACC
CTGGCCCAGG CCTCTCGCGA AGCGCAGCGC AACCGCAAAC TGGGCAACCT GGTGGCGGCC
GAGCAACTGG AAGAAAGCCA GTCCCGCGAG GCCCGTGCCC GATCGGCGGT GAGCGAGGCC
CAAGTGGCGG TCGACACCGC CCAGCTGAAC CTGGACCGTT CGGTGGTGCG CAGCCCGGTG
GACGGCTACC TCAACGACCG CGCGCCGCGT AACCACGAAT TCGTCACGGC TGGCCGCCCC
GTGCTTTCGG TCGTCGACAG TGCTTCGTAT CACGTCGACG GCTACTTTGA AGAGACCAAA
TTGGGCGGCA TCCATATTGG CGATGCCGTG GACATCCGCG TAATGGGCGA CAACACTCGC
CTGCGTGGCC ATGTGCAGAG CTTTGCCGCC GGTATCGAGG ACCGCGACCG CAGCAGCGGC
AGCAATCTGC TGCCCAACGT CAACCCGGCG TTCAGCTGGG TGCGCCTGGC CCAGCGGATC
CCGGTGCGCA TCGCTTTCGA TGAAGTGCCG CAAGACTTCC GCATGATCGC CGGGCGTACC
GCCACGGTGT CGATCATCGA GGGCCCGCGC CCATGA
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| Protein sequence | MKKPLLTLGR VVLTLLVVTF AAVLVWQMVV YYMFAPWTRD GHIRADVIQI APDVSGLIQK
VEVRDNQTVK RGDVLFTIDQ DRFTLALRQA KATLGERQET LAQASREAQR NRKLGNLVAA
EQLEESQSRE ARARSAVSEA QVAVDTAQLN LDRSVVRSPV DGYLNDRAPR NHEFVTAGRP
VLSVVDSASY HVDGYFEETK LGGIHIGDAV DIRVMGDNTR LRGHVQSFAA GIEDRDRSSG
SNLLPNVNPA FSWVRLAQRI PVRIAFDEVP QDFRMIAGRT ATVSIIEGPR P
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