Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5019 |
Symbol | gcvT |
ID | 6114011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5545784 |
End bp | 5546866 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624833 |
Product | glycine cleavage system aminomethyltransferase T |
Protein accession | YP_001751864 |
Protein GI | 170724176 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.160726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAGC GCACGCTTTT GTACGACTTG CACCTGGCGC TAGGCGCCAA GACAGTCGAT TTCGGTGGCT GGGACATGCC CCTGCACTAC GGCTCGCAAG TCGAAGAGCA CCATCAGGTG CGCAGTGACT GTGGGGTGTT CGATGTTTCC CACATGACCG TGATCGACAT AGATGGTGCC GATGCCACCG TCTGGCTGCA GCGTTTGCTG GCCAACGACG TTGCCCGCCT TGCGGGTGTC GGCAAGGCTC TGTACAGCCC GCTGCTCAAC GAAGAGGGCG GGGTTATCGA TGACCTAATC GCCTACCGCA CGGAAAATGG CTACCGGCTG ATCACCAATG CCGCCACCCG CGCCAATGTG TTGGCGTGGC TGGAGGCCCG CAGTACCGGC TTCTCGGTCG GTTTCAAGGT GCGCCCTGAC CTGGCCATTC TCGCCATCCA GGGGCCCCAG GCCCGCGAGA AGGTCGCAGC CTTGCTCAGC GCTTCGCGCG CTGCGCTTAT CCGTGAGCTG CGCCCGTTCG AAGGGGTTGG CGAGGGCGAC TGGTTCATTG CCCGCACCGG TTACACCGGT GAAGACGGGT TGGAAATCAT CCTGCCGGGC CATGAGGCCG TGGCCTTCTT CAACGACCTG GTCGGCGCTG GCATCGCCCC CAGTGGCCTT GGCGCCCGCG ACACCTTGCG CCTGGAGGCC GGCATGAACC TGTACGGCCA GGATATCGAT GAAGACCACA CCCCGCTTAC CTCCAACCTG GGCTGGAGCA TCGCCTGGGA GCCGGCCGAG CGCGATTTCA TCGGCCGCGC TGGCCTGCTG GCGGAAATCG AGCGCGGCGT GCAGGACAAG CTGGTCGGCC TGGTGCTGGA GGAGCGCGGT GTTTTGCGCG CCCATCAGGT GGTTCGCGTT GCCGGCATTG GCGAAGGGGA GATCACCAGT GGTAGTTTCT CTCCTACGCT GAGCAAATCC ATTGCCCTGG CGCGTGTACC CATGGCCACC GGTGACCGTG CCGAGGTCGA GATTCGCGGT AAGTGGTACC CGGTGCGGGT GGTCAAACCG ACCTTCGTGC GTCACGGCAA GATTCTGATC TGA
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Protein sequence | MGQRTLLYDL HLALGAKTVD FGGWDMPLHY GSQVEEHHQV RSDCGVFDVS HMTVIDIDGA DATVWLQRLL ANDVARLAGV GKALYSPLLN EEGGVIDDLI AYRTENGYRL ITNAATRANV LAWLEARSTG FSVGFKVRPD LAILAIQGPQ AREKVAALLS ASRAALIREL RPFEGVGEGD WFIARTGYTG EDGLEIILPG HEAVAFFNDL VGAGIAPSGL GARDTLRLEA GMNLYGQDID EDHTPLTSNL GWSIAWEPAE RDFIGRAGLL AEIERGVQDK LVGLVLEERG VLRAHQVVRV AGIGEGEITS GSFSPTLSKS IALARVPMAT GDRAEVEIRG KWYPVRVVKP TFVRHGKILI
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