Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4944 |
Symbol | |
ID | 6113936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5464009 |
End bp | 5464551 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641624758 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001751789 |
Protein GI | 170724101 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000118496 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACATAA TCGCTACAGA CATACCCGAC GTACTGATCA TCGAGCCCAA GCTCTTCGGT GACAGCCGCG GCTTTTTCTT CGAAAGCTTC AATGCCCGCG AGTTTGCCAG GCTGACAGGC TTTGACGCCC ATTTCGTCCA GGACAACCAC TCCCGCTCAC AGCGCGGCGT GCTCCGCGGC CTGCACTACC AGATCGATAA CCCCCAGGGG AAACTGGTGC GGGTTGTTCA GGGCGAAGTG CTGGATGTGG CCGTGGACAT CCGCCGTAGC TCACCCACAT TCGGCCGCTG GGTAGCCACC CGCCTGTGCG CCGAAGACCA CCGCCAGTTC TGGATCCCGC CAGGGTTCGC CCATGGTTTT TTGGTGTTGA GCGAATCGGC TGACTTCCTG TACAAGACCA CCGACTACTA CAACCCCGCC GCCGAGCGCT GCATCCGCTG GGATGATCCA CAGCTGGCCA TCGACTGGGG CGTGGAAGCA CCGCTGCTGT CGGCCAAGGA CCAGGCCGGC GCGCTGCTGG CTGACGCGGA CCTGTTCCCA TGA
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Protein sequence | MNIIATDIPD VLIIEPKLFG DSRGFFFESF NAREFARLTG FDAHFVQDNH SRSQRGVLRG LHYQIDNPQG KLVRVVQGEV LDVAVDIRRS SPTFGRWVAT RLCAEDHRQF WIPPGFAHGF LVLSESADFL YKTTDYYNPA AERCIRWDDP QLAIDWGVEA PLLSAKDQAG ALLADADLFP
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