| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4911 |
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| Symbol | |
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| ID | 6113901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5424369 |
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| End bp | 5425745 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624723 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_001751756 |
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| Protein GI | 170724068 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0049698 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCATCA GCGTGTTCGA CCTGTTCAAG ATCGGAGTCG GGCCCTCCAG CTCCCATACC
GTCGGCCCCA TGCGTGCGGG CGCCCTGTTT GTCCAAGGCC TGCGTGAGCG CGGCGAGCTG
GAGCAGGTGA AAAGGGTGCA GGTGCGGTTG TACGGTTCGC TGTCGGCCAC CGGTATTGGC
CACGGCTCCG ACCACGCCAC CATCATGGGC CTGATGGGCG AATGGCCGGA CGCCATCGAC
CCGGCCCAGA TCATCCCACG CATCGCCGAC CTGCGCGAAA CCAACACCCT GAAGCTGGAT
AACCGGTTGC CCATCGAATT CGTCTGGGCC CGCGACATGC TGCTGCTGGA CGAGAACCTC
CCGTACCACC CTAATGCCAT GACCCTGATC GCCGAAGGCG AGCAGGGCGA GCTGCACCGT
GACACCTACT ACTCGGTGGG TGGTGGTTTC GTGGTCGACG CCGCCCAGGC CGCCAGTGGT
GTGCTGGATG CCGACCAGAC GGTGCTGCCG TACGATTTCA ACAGTGCCGC AGAGCTGCTG
CGCCTGTGCA AGCAAAACGA CCTCAGTGTG TCGCAATTGA TGATGGCCAA CGAGAAGGTC
TGGCGCAGCG AGCAAGAGAT CCGCGCCGGC CTGCACACGC TCTGGCAAGC CATGCAGGAA
TGTGTGCACA ACGGTCTCAA GCATGAAGGT ACGCTGCCCG GCGGGCTGAA CGTGCGCCGC
CGCGCCGCCA GGCTGCACCG CAGCCTGCAG GAGATCGGCA AGCCCAACGT GATCGGCTCG
ACCATGAGTG CCATGGAGTG GGTCAACCTG TTCGCCCTGG CGGTCAACGA AGAGAACGCC
GCGGGCGGGC GCATGGTCAC TGCGCCCACC AATGGCGCGG CAGGCATCAT CCCGGCGGTG
CTGCACTACT ACATGCGGTT CAGCGATGCG GTCGACGAGT CCAACGTGGT CGACTTCTTC
CTGGCCGCCG CCGCAGTGGG CATCCTTTGC AAAAAGAACG CATCGATTTC AGGTGCCGAA
GTGGGTTGCC AAGGTGAAGT CGGTTCAGCG TGCGCCATGG CGGCGGCGGG CCTTGCCGAA
GTGCTGGGGG CGACCCCGCC GCAGGTGGAG AACGCCGCCG AGATCGCTCT TGAGCACAAC
CTGGGCCTGA CCTGCGACCC GGTCGGTGGC CTGGTGCAGG TGCCGTGTAT CGAGCGTAAT
GCCATTGCGG CAGTAAAAGC CATCAACGCT GTACAGATGG CCCTGCGCGG TGATGGCGAG
CACTTCATTT CCCTGGACCA GGTGATCCGT ACCATGCGCG ACACCGGCGC CGACATGCAT
GACAAGTATA AAGAAACCTC GCGCGGCGGC CTGGCGGTCA GCGCCATCGA ATGTTGA
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| Protein sequence | MAISVFDLFK IGVGPSSSHT VGPMRAGALF VQGLRERGEL EQVKRVQVRL YGSLSATGIG
HGSDHATIMG LMGEWPDAID PAQIIPRIAD LRETNTLKLD NRLPIEFVWA RDMLLLDENL
PYHPNAMTLI AEGEQGELHR DTYYSVGGGF VVDAAQAASG VLDADQTVLP YDFNSAAELL
RLCKQNDLSV SQLMMANEKV WRSEQEIRAG LHTLWQAMQE CVHNGLKHEG TLPGGLNVRR
RAARLHRSLQ EIGKPNVIGS TMSAMEWVNL FALAVNEENA AGGRMVTAPT NGAAGIIPAV
LHYYMRFSDA VDESNVVDFF LAAAAVGILC KKNASISGAE VGCQGEVGSA CAMAAAGLAE
VLGATPPQVE NAAEIALEHN LGLTCDPVGG LVQVPCIERN AIAAVKAINA VQMALRGDGE
HFISLDQVIR TMRDTGADMH DKYKETSRGG LAVSAIEC
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