| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4892 |
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| Symbol | |
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| ID | 6113882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5403376 |
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| End bp | 5404668 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624704 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001751737 |
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| Protein GI | 170724049 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00139713 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.55904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGTCA CCGCAACCCT GAGCCTGGGC GATCCACTGG AACCTGCACG CAAGGCCACC
GCCGAGATGC TGCAGACCCG CGAGCGCACC TACTCGCTGC CCCAGCCGTT CTACACCGAC
GAGCGTCTGT TCCAGATAGA CATGCAGGAG ATCTTCCACA AGGAATGGCT GATTGCCGGC
ATGACGTGCG AAATCCCGGC CAAGGGCAAC TACATCACCC TGCAGATCGG CAAGAACCCG
ATCATTGTGG TGCGCGGTAG CGAAGGTAAG GTGCATGCCT TCCACAACGT CTGCCGCCAT
CGCGGCTCGC GCCTGTGCGT CAGTGAGAAA GGCAAAGTGG CAAAGCTGGT CTGCCATTAC
CACCAGTGGA CGTATGAACT GGACGGCCGC CTGCTGTTCG CGGGTACTGA AATGGGCGCC
GACTTCGACA TGAAGGAGTA CGGCCTGAAG CCTGTGAACG TTAAGGTCGC AGGTGGCTAC
ATCTTCATCA GCCTGGCGGA AAACCCACCT GCTATCGACG AGTTCCTGGC CACCCTGGAC
CACTACATGG AACCGTATGA CATGGAGAAC ACCAAGGTGG CAGTGCAAAC CACCTTGATG
GAAAAGGCCA ACTGGAAGCT GGTGCTGGAA AACAACCGCG AGTGCTACCA CTGCTCCGGC
TCACACCCGG AGCTGCTGCA AACCCTGCTG GAGTGGGACG ACACCAACGA CCCGCGCGCC
AGCCAGGAAT TCAAGGACCA CGTGGCCGCC TCCGCCGCCG CCTGGGAAGC CGAGAAGATC
CCGTACCTGC ACAAGAGCCA TGGCCTGCGT AACCGCATCG TGCGCATGCC GCTGCTCAAG
GGCACCGTGT CGATGACCAT GGACGGCAAG CAGGCCTGCC AGAAGCTGAT GGGCCGTATC
AAGAACCCGG ACCTGGGCTC GATGCGCATC CTGCACCTGC CGCACTCGTG GAACCACTGC
ATGGGCGACC ACATGATCGT CTTCACCGTA TGGCCGATCA GCGCCCAGGA GACCATGGTC
ACCACCAAGT GGCTGGTGCA CAAGGATGCC GTCGAAGGTG TCGATTACGA CCCGGAACGT
ATGCGCAAGG TGTGGGATGC CACCAATGAC CAGGACCGCC GTTTGGCGGA AGAGAACCAG
CGGGGCATCA ACTCCACGGC TTACCAGCCA GGGCCGTACT CGAAGACTTA TGAGTTTGGT
GTGGTGAATT TCATCGATTG GTACAGCCAG CGCGTGCTGG AGAACCTTGG TGCAGAGCCG
GCTGCGTACC TTAAGGAAGT GCAGGCTCAG TAA
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| Protein sequence | MDVTATLSLG DPLEPARKAT AEMLQTRERT YSLPQPFYTD ERLFQIDMQE IFHKEWLIAG
MTCEIPAKGN YITLQIGKNP IIVVRGSEGK VHAFHNVCRH RGSRLCVSEK GKVAKLVCHY
HQWTYELDGR LLFAGTEMGA DFDMKEYGLK PVNVKVAGGY IFISLAENPP AIDEFLATLD
HYMEPYDMEN TKVAVQTTLM EKANWKLVLE NNRECYHCSG SHPELLQTLL EWDDTNDPRA
SQEFKDHVAA SAAAWEAEKI PYLHKSHGLR NRIVRMPLLK GTVSMTMDGK QACQKLMGRI
KNPDLGSMRI LHLPHSWNHC MGDHMIVFTV WPISAQETMV TTKWLVHKDA VEGVDYDPER
MRKVWDATND QDRRLAEENQ RGINSTAYQP GPYSKTYEFG VVNFIDWYSQ RVLENLGAEP
AAYLKEVQAQ
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