Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4879 |
Symbol | |
ID | 6113869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5386841 |
End bp | 5388040 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624691 |
Product | formaldehyde dehydrogenase, glutathione-independent |
Protein accession | YP_001751724 |
Protein GI | 170724036 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
TIGRFAM ID | [TIGR02819] formaldehyde dehydrogenase, glutathione-independent |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.734833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGCA ATCGTGGAGT GGTGTACCTG GGCGCTGGCA AGGTCGAGGT GCAGAAAATC GACTACCCGA AGATGCAGGA CCCGCGCGGC AAGAAGATCG AGCACGGCGT CATCCTCAAG GTGGTCTCCA CCAACATCTG CGGCTCCGAC CAGCACATGG TCCGCGGCCG CACCACTGCC CAGGTCGGCC TGGTCCTGGG CCACGAAATC ACCGGTGAAA TCGTCGAGAT GGGGCGTGAC GTCGAACGCC TGAAAATCGG TGACCTGGTG TCGGTGCCGT TCAACGTCGC CTGCGGCCGC TGCCGCTCCT GCAAAGAGAT GCACACCGGT GTCTGCCTCA CCGTCAACCC GGCCCGCGCC GGCGGTGCCT ACGGTTACGT TGACATGGGC GACTGGACCG GCGGCCAGGC TGAATACGTG CTGGTACCGT ATGCCGACTT CAACCTGCTG AAACTGCCGG ATCGCGACAA GGCCATGGAG AAGATCCGTG ACCTGACCTG CCTGTCCGAC ATCCTGCCAA CCGGCTACCA CGGTGCCGTG ACTGCTGGCG TAGGCCCAGG CAGTACCGTT TACGTCGCAG GTGCTGGCCC GGTCGGCCTG GCCGCGGCTG CCTCGGCCCG CCTGCTGGGC GCTGCCTGCG TCATCGTCGG CGATCTGAAC CCGGCCCGCC TGGCCCACGC CAAGTCCCAG GGCTTTGAAG TGGTCGACCT GTCCAAGGAC ACCCCGCTGC ACGAACAGAT CATCGACATC CTCGGCGAGC CGGAAGTGGA CTGTGCAGTT GATGCGGTGG GCTTCGAGGC ACGTGGTCAT GGGCATGAAG GCGCCAAACA TGAAGCACCG GCCACTGTGC TGAACTCGCT GATGCAGGTC ACTCGCGTTG CCGGCAACAT CGGTATCCCG GGCCTGTACG TGACCGAAGA CCCAGGCGCG GTGGATGCTG CCGCCAAGAT CGGCGCGCTG AGCATCCGCT TTGGCCTGGG ATGGGCAAAA TCGCACAGCT TCCACACCGG CCAGACCCCG ACCATGAAAT ACAACCGCCA ATTGATGCAG GCGATCATGT GGGACCGGAT CAACATCGCT GAAGTTGTTG GTGTGCAGGT CATCAGCCTG GATCAGGCGC CAGAAGGGTA CGGCGAGTTC GATGCCGGGG TGCCGAAGAA GTTTGTGATT GATCCGCACA AGACGTTTAG CGCGGCGTAA
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Protein sequence | MSGNRGVVYL GAGKVEVQKI DYPKMQDPRG KKIEHGVILK VVSTNICGSD QHMVRGRTTA QVGLVLGHEI TGEIVEMGRD VERLKIGDLV SVPFNVACGR CRSCKEMHTG VCLTVNPARA GGAYGYVDMG DWTGGQAEYV LVPYADFNLL KLPDRDKAME KIRDLTCLSD ILPTGYHGAV TAGVGPGSTV YVAGAGPVGL AAAASARLLG AACVIVGDLN PARLAHAKSQ GFEVVDLSKD TPLHEQIIDI LGEPEVDCAV DAVGFEARGH GHEGAKHEAP ATVLNSLMQV TRVAGNIGIP GLYVTEDPGA VDAAAKIGAL SIRFGLGWAK SHSFHTGQTP TMKYNRQLMQ AIMWDRINIA EVVGVQVISL DQAPEGYGEF DAGVPKKFVI DPHKTFSAA
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