Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4862 |
Symbol | |
ID | 6113852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5364355 |
End bp | 5365404 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624674 |
Product | lipopolysaccharide heptosyltransferase II |
Protein accession | YP_001751707 |
Protein GI | 170724019 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.470567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATAC TGATCATTGG CCCCAGCTGG GTCGGCGACA TGGTGATGGC GCAAACCCTG TTCCAGTGCC TGAAACAGCA GCACCCCGAC TGCGTGATCG ATGTGCTGGC ACCCGAGTGG AGCCGGCCGA TCCTTGAGCG CATGCCCCAA GTGCGTCAGG CCTTGAGCTT CCCGCTCGGC CATGGCGCGC TGGAACTGGC GACGCGCCGG CGCATCGGCA AGTCCCTGGC CGGCCAGTAC GACCAGGCGA TCCTGCTGCC CAACTCGCTG AAGTCAGCGC TGGTGCCGTT CTTTGCCGGC ATTCCCAAAC GCACCGGCTG GCGTGGCGAA ATGCGCTTCG GCCTGCTCAA CGACGTGCGC AAACTGGACA AGGCGCGTTA CCCGCTGATG ATCGAGCGCT TCATGGCCCT GGCCTACGCG CCGGGTGCCG AGCTGCCGCA GCCTTATCCC CGGCCTGGGC TGCAGATCCA GGCGCAGAGC CGTGATGCAG CGCTGGCCAA GTTCGGTCTG GAGCTGGACC GCCCGGTGCT TGCGCTGTGC CCAGGTGCCG AGTTCGGTGA AGCCAAGCGC TGGCCGGCAG AGCACTACGC CAGCGTTGCC GACGCCATGA TTCGTCAAGG CTGGCAGGTT TGGCTGTTCG GTTCGAAAAA TGATCACCCG GTCGGCGAGC AGATTCGCGA CCGGCTGATC CCGGGTTTGC GTGAAGAATC CTATAACCTG GCGGGCGAAA CCTCGTTGGC CGAGGCGATC GACCTTATGT CCTGCGCCAA CGCGGTGGTG TCCAACGACT CCGGGCTGAT GCACGTTGCT GCGGCGTTGA ACCGCCCACT GGTTGCCGTT TATGGCTCGA CCTCGCCGGG CTTTACCCCG CCGTTGGCCG AGCAGGTGGA AATCGTGCGC ACCGGCATCG AGTGCAGCCC ATGCTTCGAC CGCACCTGCC GTTTCGGCCA CTACAACTGC CTGCGTCTGC TGGAGCCTGG CAAAGTCATC GCCGCCCTGC ACAGCCTGGG TGGGCCGAAC CTGATCGATA CCGTGGCCGA GGTCGAGTAA
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Protein sequence | MRILIIGPSW VGDMVMAQTL FQCLKQQHPD CVIDVLAPEW SRPILERMPQ VRQALSFPLG HGALELATRR RIGKSLAGQY DQAILLPNSL KSALVPFFAG IPKRTGWRGE MRFGLLNDVR KLDKARYPLM IERFMALAYA PGAELPQPYP RPGLQIQAQS RDAALAKFGL ELDRPVLALC PGAEFGEAKR WPAEHYASVA DAMIRQGWQV WLFGSKNDHP VGEQIRDRLI PGLREESYNL AGETSLAEAI DLMSCANAVV SNDSGLMHVA AALNRPLVAV YGSTSPGFTP PLAEQVEIVR TGIECSPCFD RTCRFGHYNC LRLLEPGKVI AALHSLGGPN LIDTVAEVE
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