Gene PputW619_4786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4786 
Symbol 
ID6113775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5275155 
End bp5275973 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID641624597 
Productphosphoglycolate phosphatase 
Protein accessionYP_001751631 
Protein GI170723943 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.602175 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TCGAGCAGCT GTTCCCCGGG ACGCTGCCCA GGCTGGTGAT GTTCGATCTG 
GACGGTACCC TGATCGATTC AGTCCCCGAC CTGGCCGCAG CCGTTGACCG CATGCTGCTC
GAACTTGGCC GTCCGGCCGC CGGCCTTGAC GCCGTGCGGC ACTGGGTCGG CAACGGCGCA
CCGGTGCTGG TGCGCCGCGC ACTTGCCGGC GGCCTGGACC ACGCGACCGT AGACGATGAG
CTGGCCGAGC GCGGCCTTGC ACTGTTCATG GAGGCGTACG CCGAAAGCCA TGATCTAACG
GTTGTATACC CTGGTGTGCA CGACACCTTG CGCTGGCTGC GCAAGCAGGG CGTGGAGATG
GCGCTGATCA CCAACAAGCC TGAACGCTTC GTCGCACCGT TGCTCGACCA GATGAAGATC
GGCCGTTATT TCCGCTGGAT CATCGGCGGC GATACCCTGC CACAGAAGAA GCCCGATCCT
GCTGCGTTGC TGTTCGTCAT GAAAATGGCC GGCGTGAAGC CCGGCCAGGC GCTGTTTGTG
GGGGACTCGC GCAGTGATGT GCTGGCGGCC AAGGCTGCCG GCGTGCAGTG CGTTGGGCTG
AGCTATGGCT ATAACCACGG CCGGCCGATC GATGAGGAAG CGCCCAGCCT GGTCATAGGC
GACCTGCGCC TGCTGCTGCC TGGTTGCGTA GTCACCGACA CTGGGATAAC GTTGGCGGAC
CTTCAAGCCT CACAAGACAG AGAGCCCACC GTGGTGGTTA CCGGCAAATT CTGGATGAAA
GTCATCAAGG CCCTGGCCCG TTGGCGTTGG CGCGCCTGA
 
Protein sequence
MSGFEQLFPG TLPRLVMFDL DGTLIDSVPD LAAAVDRMLL ELGRPAAGLD AVRHWVGNGA 
PVLVRRALAG GLDHATVDDE LAERGLALFM EAYAESHDLT VVYPGVHDTL RWLRKQGVEM
ALITNKPERF VAPLLDQMKI GRYFRWIIGG DTLPQKKPDP AALLFVMKMA GVKPGQALFV
GDSRSDVLAA KAAGVQCVGL SYGYNHGRPI DEEAPSLVIG DLRLLLPGCV VTDTGITLAD
LQASQDREPT VVVTGKFWMK VIKALARWRW RA