Gene PputW619_4749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4749 
SymbolrplC 
ID6113731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5229364 
End bp5229999 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content59% 
IMG OID641624553 
Product50S ribosomal protein L3 
Protein accessionYP_001751594 
Protein GI170723906 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000212363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTG GTGTAGTCGG TCGCAAGTGC GGTATGACCC GCATTTTCAC CGAAGAAGGT 
GTCTCCATTC CGGTCACGGT CATTGAGATC GAGCCGAATC GCGTCACCCA GTTCAAAACT
GAAGAAACCG ATGGCTACCG TGCAGTGCAA GTCACTGTCG GCGAGCGTCG TGCTTCGCGT
GTGACTGCCG CTCAGGCAGG TCACTTCGCC AAGGCCAACG TTGCCGCTGG TCGCGGTGTC
TGGGAGTTCC GCCTTGAAGA AGGCGAGTTC CAGGCTGGCG ACTCGATCAA AGCTGAACTC
TTCACTGCAG GCCAGCTGGT AGACGTTACT GGTCAGTCCA AAGGTAAAGG CTTTGCCGGT
ACCATCAAGC GCTGGAACTT CCGTGGCCAG GACAACACCC ACGGTAACTC CGTGTCGCAC
CGTGTCCCAG GCTCCATCGG CCAGTGCCAG ACTCCTGGTC GTGTGTTCAA GGGCAAGAAA
ATGTCCGGTC ACATGGGCGC CGAGCGCGTG ACTGTTCAGT CCCTGGAAGT AGTTCGCGTA
GACGCTGAGC GCAACCTGCT GCTGGTCAAG GGTGCCGTTC CTGGCGCTAC TGGCGGCGAC
GTGGTTGTAC GTCCAGCTGT CAAGGCTCGC GGTTAA
 
Protein sequence
MTIGVVGRKC GMTRIFTEEG VSIPVTVIEI EPNRVTQFKT EETDGYRAVQ VTVGERRASR 
VTAAQAGHFA KANVAAGRGV WEFRLEEGEF QAGDSIKAEL FTAGQLVDVT GQSKGKGFAG
TIKRWNFRGQ DNTHGNSVSH RVPGSIGQCQ TPGRVFKGKK MSGHMGAERV TVQSLEVVRV
DAERNLLLVK GAVPGATGGD VVVRPAVKAR G