Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4749 |
Symbol | rplC |
ID | 6113731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5229364 |
End bp | 5229999 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641624553 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001751594 |
Protein GI | 170723906 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000212363 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATTG GTGTAGTCGG TCGCAAGTGC GGTATGACCC GCATTTTCAC CGAAGAAGGT GTCTCCATTC CGGTCACGGT CATTGAGATC GAGCCGAATC GCGTCACCCA GTTCAAAACT GAAGAAACCG ATGGCTACCG TGCAGTGCAA GTCACTGTCG GCGAGCGTCG TGCTTCGCGT GTGACTGCCG CTCAGGCAGG TCACTTCGCC AAGGCCAACG TTGCCGCTGG TCGCGGTGTC TGGGAGTTCC GCCTTGAAGA AGGCGAGTTC CAGGCTGGCG ACTCGATCAA AGCTGAACTC TTCACTGCAG GCCAGCTGGT AGACGTTACT GGTCAGTCCA AAGGTAAAGG CTTTGCCGGT ACCATCAAGC GCTGGAACTT CCGTGGCCAG GACAACACCC ACGGTAACTC CGTGTCGCAC CGTGTCCCAG GCTCCATCGG CCAGTGCCAG ACTCCTGGTC GTGTGTTCAA GGGCAAGAAA ATGTCCGGTC ACATGGGCGC CGAGCGCGTG ACTGTTCAGT CCCTGGAAGT AGTTCGCGTA GACGCTGAGC GCAACCTGCT GCTGGTCAAG GGTGCCGTTC CTGGCGCTAC TGGCGGCGAC GTGGTTGTAC GTCCAGCTGT CAAGGCTCGC GGTTAA
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Protein sequence | MTIGVVGRKC GMTRIFTEEG VSIPVTVIEI EPNRVTQFKT EETDGYRAVQ VTVGERRASR VTAAQAGHFA KANVAAGRGV WEFRLEEGEF QAGDSIKAEL FTAGQLVDVT GQSKGKGFAG TIKRWNFRGQ DNTHGNSVSH RVPGSIGQCQ TPGRVFKGKK MSGHMGAERV TVQSLEVVRV DAERNLLLVK GAVPGATGGD VVVRPAVKAR G
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