| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4723 |
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| Symbol | rplQ |
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| ID | 6113705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5216704 |
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| End bp | 5217090 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641624527 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001751568 |
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| Protein GI | 170723880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.51527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.268012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCATC GTAAAAGTGG ACGTCACCTG AGCCGTACCA GCTCTCACCG CAAAGCTATG
TTCCAGAACA TGGCTGTGTC GCTGATCGAG CACGAGCTGA TCAAAACCAC CCTGCCGAAA
GCCAAGGAAC TGCGCCGCGT TGCCGAGCCG CTGATCACCC TGGCCAAGGA AGACAGCGTT
GCTAACCGCC GTCTGGCCTT CGACCGTACC CGTTCGAAGT CTGCTGTTGG CAAACTGTTC
AACGATCTGG GCAAGCGTTA CGCCACCCGT CAGGGCGGCT ACCTGCGCAT CCTGAAGTGC
GGTTTCCGCG CTGGCGACAA CGCGCCTATG GCGTACGTCG AGCTGGTTGA TCGTCCGGTC
GGTGGTGCTG TAGAAGCTGC CGAGTAA
|
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| Protein sequence | MRHRKSGRHL SRTSSHRKAM FQNMAVSLIE HELIKTTLPK AKELRRVAEP LITLAKEDSV
ANRRLAFDRT RSKSAVGKLF NDLGKRYATR QGGYLRILKC GFRAGDNAPM AYVELVDRPV
GGAVEAAE
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