| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4721 |
|---|
| Symbol | |
|---|
| ID | 6113703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5214463 |
|---|
| End bp | 5214927 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641624525 |
|---|
| Product | bacterioferritin |
|---|
| Protein accession | YP_001751566 |
|---|
| Protein GI | 170723878 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2193] Bacterioferritin (cytochrome b1) |
|---|
| TIGRFAM ID | [TIGR00754] bacterioferritin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.213335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGTC ACCCGGACGT AATCAATTAT CTCGTCACGT TGCTGAAGGG CGAACTGGCC
GCACGCGATC AGTACTTCAT TCACTCGCGC ATGTACGAAG ACTGGGGCCT GTCCAAGCTC
TACGAACGCA TCAACCATGA GATGGAAGAG GAAACCCAGC ACGCCGATGC GCTTATGCGG
CGTATCCTCA TGCTCGAAGG CACCCCCGAT ATGCGCGCGG ATGATCTGGA AGTGGGCAGT
ACAGTGCCGG AAATGATCGA AGCGGACCTC AAGCTCGAGT ACAAGGTTCG TGCGGCCCTG
TGCAAGGGCA TCGAGCTGTG CGAGCTTCAC AAGGATTACA TCAGTCGCGA TATCCTGCGT
GCCCAGCTGG CCGATACCGA AGAGGATCAC ACCTACTGGC TTGAGAAGCA GCAGGGCCTG
ATCAAGGCCA TCGGTCTGGA AAACTACCTG CAGTCGCAGA TGTAA
|
|---|
| Protein sequence | MQGHPDVINY LVTLLKGELA ARDQYFIHSR MYEDWGLSKL YERINHEMEE ETQHADALMR
RILMLEGTPD MRADDLEVGS TVPEMIEADL KLEYKVRAAL CKGIELCELH KDYISRDILR
AQLADTEEDH TYWLEKQQGL IKAIGLENYL QSQM
|
|---|
| |