| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4707 |
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| Symbol | |
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| ID | 6113689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5197776 |
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| End bp | 5199680 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624512 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001751553 |
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| Protein GI | 170723865 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.590641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATC CCAGCGCTAG CGCCTATAAC GCAGACGCCA TCGAAGTCCT CTCGGGCCTT
GACCCGGTCC GTAAACGGCC GGGCATGTAC ACCGATACCA GCCGGCCCAA CCACCTGGCC
CAGGAAGTCA TCGACAACAG TGTCGACGAA GCCCTGGCTG GCCACGCCCG TTCGGTGCAG
GTCATCCTCC ATGCCGACCA CTCGCTGGAG GTCAGCGACG ATGGCCGCGG CATGCCGGTG
GATATCCATC CGGAAGAGGG CGTATCGGGG GTCGAGCTGA TCCTCACCAA GCTGCACGCC
GGCGGCAAGT TCTCCAACAA AAACTACCAG TTCTCCGGGG GCCTGCACGG TGTCGGCATC
TCGGTGGTCA ATGCTCTGTC GACCCAGGTG CGCGTGCGCG TCAAGCGTGA CGGCAATGAA
TACCAGATGA CCTTCGCTGA TGGCTTCAAG GCCAGCGAGC TGGAAGTGGT CGGTACGGTC
GGCAAGCGCA ACACCGGAAC CAGTGTGTAT TTCAGCCCCG ACCCGAAGTA TTTCGATTCA
CCCAAGTTTT CCATCAGTCG CCTCAAGCAC GTGCTCAAGG CCAAGGCTGT ACTGTGCCCG
GGTCTGTTGG TCAGCTTCGA GGACAAGGCC AGCGGCGAGA AGGTCGAGTG GCACTACGAG
GATGGCCTGC GTTCCTACCT GGTCGACTCT GTCAGCGAGT TCCAACGCCT GCCCGACGAG
CCCTTCTGCG GCAGCCTGGC CGGCAACAAG GAAGCCGTGG ACTGGGCCTT GCTGTGGCTG
CCCGAAGGCG GTGACAGTGT TCAGGAAAGC TACGTCAACC TGATCCCCAC CGCCCAGGGC
GGTACCCACG TCAACGGCCT GCGTCAGGGC CTGCTCGATG CCATGCGAGA ATTCTGCGAG
TTCCGCAACC TGTTGCCGCG TGGGGTCAAG CTGGCGCCCG AAGACGTCTG GGAGCGCATC
ACTTTCGTGC TCTCGATGAA AATGCAGGAG CCACAGTTCT CTGGGCAGAC CAAAGAGCGT
CTGTCGTCCC GCGAGGCAGC AGCCTTTGTA TCGGGCGTGG TCAAGGACGC GTTCAGCCTG
TGGCTCAATG CACACCCCGA GCTGGGCATG CAGCTGGCGG AACTGGCCAT TAGCAACGCT
GGCCGCCGCC TCAAGGCCAG CAAGAAAGTC GAGCGTAAGC GCGTCACTCA GGGCCCTGCG
CTGCCGGGCA AGCTGGCCGA CTGCGCAGGC CAGGACCCAA TGCGTGCCGA GCTGTTTCTG
GTTGAGGGTG ACTCGGCCGG TGGCTCTGCC AAGCAGGCAC GCGACAAGGA ATTCCAGGCG
ATCCTGCCGC TGCGCGGCAA GATCCTCAAT ACCTGGGAAG TGGACGGTGG CGAGGTGCTT
GCCAGCCAAG AAGTGCACAA CATCGCCGTC GCCATCGGTG TCGATCCGGG CGCTGCCGAC
CTGTCGCAGC TGCGCTACGG CAAGATCTGC ATCCTCGCCG ACGCCGACTC CGACGGCCTG
CACATCGCTA CCCTGCTGTG CGCGCTGTTC GTCCAGCACT TCCGTCCGTT GGTCGAAGCA
GGCCACGTTT ATGTCGCCAT GCCACCGCTG TACCGTATCG ACCTGGGCAA GGAAATCTAC
TACGCCCTGG ACGAGGCTGA ACGCGACGGC ATTCTCGACC GCCTGGTGGC CGAGAAAAAG
CGTGGCAAGC CACAGGTCAC CCGCTTCAAG GGGCTGGGCG AGATGAACCC GCCGCAATTG
CGCGAAACTA CCATGGACCC GAACACCCGG CGCCTGGTCC AGCTGACCCT GGATGACCTG
CAGGGTACTA CCGAAATCAT GGATATGCTG TTGGCCAAGA AACGGGCGGG CGATCGCAAG
AATTGGCTGG AGACCAAAGG TAATCTGGCC GAGGTTCTGG TTTGA
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| Protein sequence | MANPSASAYN ADAIEVLSGL DPVRKRPGMY TDTSRPNHLA QEVIDNSVDE ALAGHARSVQ
VILHADHSLE VSDDGRGMPV DIHPEEGVSG VELILTKLHA GGKFSNKNYQ FSGGLHGVGI
SVVNALSTQV RVRVKRDGNE YQMTFADGFK ASELEVVGTV GKRNTGTSVY FSPDPKYFDS
PKFSISRLKH VLKAKAVLCP GLLVSFEDKA SGEKVEWHYE DGLRSYLVDS VSEFQRLPDE
PFCGSLAGNK EAVDWALLWL PEGGDSVQES YVNLIPTAQG GTHVNGLRQG LLDAMREFCE
FRNLLPRGVK LAPEDVWERI TFVLSMKMQE PQFSGQTKER LSSREAAAFV SGVVKDAFSL
WLNAHPELGM QLAELAISNA GRRLKASKKV ERKRVTQGPA LPGKLADCAG QDPMRAELFL
VEGDSAGGSA KQARDKEFQA ILPLRGKILN TWEVDGGEVL ASQEVHNIAV AIGVDPGAAD
LSQLRYGKIC ILADADSDGL HIATLLCALF VQHFRPLVEA GHVYVAMPPL YRIDLGKEIY
YALDEAERDG ILDRLVAEKK RGKPQVTRFK GLGEMNPPQL RETTMDPNTR RLVQLTLDDL
QGTTEIMDML LAKKRAGDRK NWLETKGNLA EVLV
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