| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4684 |
|---|
| Symbol | |
|---|
| ID | 6113666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5173369 |
|---|
| End bp | 5174670 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641624489 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_001751530 |
|---|
| Protein GI | 170723842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.712247 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTCTTTG AGCGCCACGG TGGTGGTGAG CGGGCGCTGC TCGTTCACTT GGAAGGTCAG
AACCCTGAGG CGCGCGAAGA CCCGCAGGAG TTTCAGGAAC TGGCATTGTC GGCCGGAGCC
GACATCGTCT CGCTGGTCAC AGTGGCAAGG CATCAGCCTA CCGCCAAATA CCTGATTGGC
AGTGGCAAGG TCGAGGAATT GCGCGACCTG GTCAAAGCCG AACAGGTTGA CCTGGTGATT
TTCAATCACA CCCTCACGCC CAGTCAGGAG CGCAACCTCG AACGAGTCTT CGAGTGTCGC
GTGCTTGACC GTACCGGGCT GATTCTCGAC ATCTTCGCCC AACGGGCGCG TACCCATGAA
GGCAAGCTGC AGGTCGAACT GGCCCAGCTC GAGCACATGA GCACGCGGCT GGTACGCGGC
TGGACCCACC TTGAGCGTCA GAAGGGTGGT ATCGGTATGC GCGGCCCGGG TGAAACCCAG
TTAGAAACCG ACCGGCGTCT GTTGCGGGTG CGCCTGCGCC AGATCAAGTC ACGCCTGGAA
AAGGTTCGCA GCCAGCGTGA GCAGGCTCGC CGGGGGCGTC GGCGCGCGGA TATTCCGTCG
GTATCGCTGG TGGGCTACAC CAACGCTGGC AAGTCCACGC TGTTCAACGC CCTGACTGAA
TCCGATGTGT ACGCCGCCGA CCAATTGTTC GCCACCCTCG ACCCGACCCT GCGCCGGCTC
CAGCTCGACG ACCTTGGGCC GATCGTGCTG GCTGACACCG TTGGCTTCAT TCGTCACCTT
CCGCACAAGC TGGTCGAGGC ATTTCGGGCT ACGCTCGAAG AGTCGAGCAA CTCCGACCTG
CTGCTGCATG TGATCGACGC CCATGAGCCT GAGCGCATGG AGCAGATCGA GCAGGTGCTG
GCAGTATTGG GCGAGATCGG TGCCGAAGGC TTGCCGATAC TCGAGGTCTA TAACAAACTC
GACTTGCTTG AAGATGTCGA GCCGCAGATC CAGCGCAATG CCGACGGCAA GCCGGAGCGG
GTCTGGGTAT CGGCTCGAGA TGGCCGTGGC CTGGAGCTGG TCGGTCAGGC CATTGCCGAG
TTGCTGGGGG ATGATCTTTT TGTCGGTACC CTGTGCCTGG AGCAGCGTTT TGCCCGCTTG
CGCGCGCAAT TCTTTGACTT GGGTGCGGTG CAGAGTGAAG AGCATGACGA AGAAGGGCGC
AGCCTGCTGA GTGTGCGATT GCCCAGGGTC GAGTTGAATC GCCTGGTCAG CCGCGAAGGC
ATGGAGCCGC AAGTGTTTGT CGAGCAACAC ACTTTGCAAT AA
|
|---|
| Protein sequence | MFFERHGGGE RALLVHLEGQ NPEAREDPQE FQELALSAGA DIVSLVTVAR HQPTAKYLIG
SGKVEELRDL VKAEQVDLVI FNHTLTPSQE RNLERVFECR VLDRTGLILD IFAQRARTHE
GKLQVELAQL EHMSTRLVRG WTHLERQKGG IGMRGPGETQ LETDRRLLRV RLRQIKSRLE
KVRSQREQAR RGRRRADIPS VSLVGYTNAG KSTLFNALTE SDVYAADQLF ATLDPTLRRL
QLDDLGPIVL ADTVGFIRHL PHKLVEAFRA TLEESSNSDL LLHVIDAHEP ERMEQIEQVL
AVLGEIGAEG LPILEVYNKL DLLEDVEPQI QRNADGKPER VWVSARDGRG LELVGQAIAE
LLGDDLFVGT LCLEQRFARL RAQFFDLGAV QSEEHDEEGR SLLSVRLPRV ELNRLVSREG
MEPQVFVEQH TLQ
|
|---|
| |