| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4682 |
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| Symbol | |
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| ID | 6113664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5171222 |
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| End bp | 5172091 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624487 |
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| Product | HflC protein |
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| Protein accession | YP_001751528 |
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| Protein GI | 170723840 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA AATCGCTGAT CGCCCTGATC GCAGCTGTGG TGCTGGCCGT CGTGGCCTGG
AACAGCTTCT ACATCGTGGC CCAGACCGAA CGTGCGGTAC TGCTGCAATT CGGCCGTGTG
GTCCAGGCGG ATGTCCAGCC TGGCCTGCAT GTGAAGATTC CTTATGTGAA CCAGGTTCGC
AGGTTCGACG CCCGCCTGAT GACCCTCGAC GCCCCGACCC AGCGGTTCCT GACCCTGGAG
AAGAAAGCGG TGATGGTCGA CGCCTACGCC AAGTGGCGCG TTCAGGATGC CGAGCGTTTC
TATACCGCGA CTTCCGGCCT CAAGCAGATC GCCGATGAAC GTCTGTCTCG TCGCCTGGAA
AGCGGCCTGC GTGACCAGTT CGGTAAGCGT ACCCTGCACG AAGTGGTTTC CGGTGAGCGT
GACGCGCTGA TGGCTGACAT CACTGCATCG CTGAACCGTA TGGCCAACAA GGAGCTGGGT
ATCGAGGTGG TCGATGTGCG CGTCAAGGCC ATCGACCTGC CCAAAGAAGT CAATCGCAGC
GTGTTCGACC GTATGAGCAC CGAGCGTGAG CGGGAAGCCC GCGAGCATCG CGCCAAGGGT
AACGAACTGG CAGAGGGTAT CCGTGCGGAT GCCGACCGTC AGCGTCGCGT GCTGCTGGCC
GAAGCCTATC GTGAAGCGGA AGAAACCCGC GGTGATGGTG ATGCCCAGTC GGCCGCCATC
TATGCCAAGG CTTACACCCA GGACGCTGAT TTCTATGCGT TCTACCGTAG CCTTCAGGCA
TACCGCGAGA GCTTCTCCAG CAAGAGCGAT GTCCTGGTCC TGGATCCGAA GAACGAGTTC
TTCCGCTTCC TGGACAAGAG CAGGCCCTGA
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| Protein sequence | MSNKSLIALI AAVVLAVVAW NSFYIVAQTE RAVLLQFGRV VQADVQPGLH VKIPYVNQVR
RFDARLMTLD APTQRFLTLE KKAVMVDAYA KWRVQDAERF YTATSGLKQI ADERLSRRLE
SGLRDQFGKR TLHEVVSGER DALMADITAS LNRMANKELG IEVVDVRVKA IDLPKEVNRS
VFDRMSTERE REAREHRAKG NELAEGIRAD ADRQRRVLLA EAYREAEETR GDGDAQSAAI
YAKAYTQDAD FYAFYRSLQA YRESFSSKSD VLVLDPKNEF FRFLDKSRP
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