| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4659 |
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| Symbol | |
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| ID | 6113640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5144756 |
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| End bp | 5145892 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641624465 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001751508 |
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| Protein GI | 170723820 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00580673 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGA CGTTTTACAA GAAAGGTTTC CTGGCACTGG CCGTAGCTAC GGCACTGGGT
GTTTCTTCGT ATGTTCAGGC CGACGTCAAG ATCGGTGTCG CGGGCCCGAT GACCGGTGCT
AACGCAGCGT TTGGCGAGCA ATACATGAAA GGTGCCCAGG CGGCAGCTGA CAAGATCAAC
GCTGCCGGTG GCGTCAACGG CGAGAAAATC ATCCTGGTCA AAGGCGATGA CGCCTGCGAG
CCGAAACAGG CTGTATCGGT TGCCAACCGT TTGGTCGATC AGGACAAGGT AATCGGTGTG
GTGGGCCACT TCTGCTCCTC CAACACCATT CCAGCTTCCG AGGTGTATGA CGAAGCAGGC
GTGATCGCCA TCACCCCTGG CTCTACCAAC CCACAAGTCA CCGAGCGCGG GCTGAGCGCC
ATGTTCCGCA TGTGCGGCCG TGACGACCAG CAGGGCATCG TTGCCGGTGA CTACATCGTC
GATGTGCTCA AGGGCAAGAA GGTGGCGGTG CTGCACGACA AGGATACCTA CGGCCAGGGC
CTGGCCGATG CAACCAAGGC GCAGCTGGAG AAGCGTGGCG TCAAGCCGGT GCTGTATGAA
GGCCTGACCC GTGGCGAGAA AGACTTCAGC GCCGTGGTGA CCAAGATCCG CTCCACCGGT
GCCGACGTGG TCTACTTTGG CGGCCTTCAC CCCGAAGCCG GTCCGCTGGT ACGTCAACTG
CGCGAACAAG GCCTGAAGGA CGTCAAGTTC ATGTCCGATG ACGGCATCGT CACCGACGAA
CTGGTCGCAA CTGCGGGCGG CGCCCAGTAC GTAGACGGCG TGTACATGAC CTTCGGCGCC
GACCCGCGCA TGCTGCCAGA CAGCAAGGCG GTGGTGGAAG AATTCCGCAA AGCCGGTACC
GAGCCTGAAG GCTACACCCT CTACGCCTAC GCTTCGCTGC AAGCCCTGGC CGCTGCCTTC
AACGGCGCCA AGTCGAACAA GGGCGAAGAC GCTGCCAAGT GGCTCAAGGC CAACCCGGTG
CAGACCGTCA TGGGCGAGAA GAAGTGGGAC AGCAAGGGCG ACCTGACTGT CTCCGACTAC
GTGGTCTACC AGTGGGACAA GGACGGCAAG TACCACCAGC TGGAAAAACA AAAATAA
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| Protein sequence | MSQTFYKKGF LALAVATALG VSSYVQADVK IGVAGPMTGA NAAFGEQYMK GAQAAADKIN
AAGGVNGEKI ILVKGDDACE PKQAVSVANR LVDQDKVIGV VGHFCSSNTI PASEVYDEAG
VIAITPGSTN PQVTERGLSA MFRMCGRDDQ QGIVAGDYIV DVLKGKKVAV LHDKDTYGQG
LADATKAQLE KRGVKPVLYE GLTRGEKDFS AVVTKIRSTG ADVVYFGGLH PEAGPLVRQL
REQGLKDVKF MSDDGIVTDE LVATAGGAQY VDGVYMTFGA DPRMLPDSKA VVEEFRKAGT
EPEGYTLYAY ASLQALAAAF NGAKSNKGED AAKWLKANPV QTVMGEKKWD SKGDLTVSDY
VVYQWDKDGK YHQLEKQK
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