Gene PputW619_4614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4614 
Symbol 
ID6113595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5098425 
End bp5101196 
Gene Length2772 bp 
Protein Length923 aa 
Translation table11 
GC content63% 
IMG OID641624420 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001751463 
Protein GI170723775 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.863482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.296425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGGC TTCGGATTGC CACAGCTCTG ATCGTCAGCT TGCTGACCCT GCTCTGCCTG 
CTCCCGGCTT CGGCCGACCA AGGCGGAGGC TGGTCCGTTT TGCTCGACGT ACAAGCCAAC
CTGCAATTGA GCGACGTCCG CTCGGATCGC TATCGCAACC AGTTCAGCCC TACTACCCTG
AGCGACCTAG ATGCCGCGCC GTCGCAACAG GCCCTGTGGC TACACTATCG CCTCGAACCA
GGTGACCAGG AGCAACTGCT GCGGGTCTTT GCCCCGGACC TTTCGCGTCT GGACCTCTAC
GCCCTCGACG GAGACAGGCT GCTACGCCAG CTGCACCACG GGCGCCAGGC CGGCAACGCC
AGCCCGACCC TGCGCGGCAG CGATCACGTT TTGCCCTTGC CAAACAGCCC GAAAGCGGTG
GACATCTACC TGCGCCTGGT TTCCGAGCAT CAACTGCGCC CGGCCATCAG CCTGGAGCCT
GCGGCAGTCG CCGCTTCAAA CCATGGCCAG CCGTTGCTGT TCGGCATGCT CTTCGGCGGC
CTGGTCATGC TCATCCTGCA CAACCTGATC CGCTTTCTGT ACACCCGCTC CAGCACCACC
CTGATCCTTG CGCTGTACCA CGGGCTGATG CTGCTCAGCG GCCTGATCCT GCTCAACCTC
AGCGGCCCCT GGTGGCACCT GTGGCACAGT GCGCAAACCC CGGCCGCCTA TCTGACCCTG
GTGCTGGCGG GCCTCGCGGG GCTCTATTTC ACCCAGCACT TCTTCTCGCG CTGCAGTTCC
CCGCAGCTCA ATCGCTTGTT GCAAGGCGAA ATGCTGGTGG CCGGAGTCAG CGGCCTGATC
CTGCTGTTCG TGGATACCCT TCCACTCAAC CTGATGACCT ACGCCCTGCT GGCCCTGGGC
AGTGTGAGCA TGCTGCTGGT CAGCAGCTAC CACTGGTACA AAGGTTATGC GCCGGCACGC
CTGTTCAGCC TGGCCATGGT GGTGTTCAAC CTGGGCGGGC TGGTGCTGCT GCCGGCCCTG
CTCGGTCTGA CCCGCACCTC GACGCCTTGG CTGCTGTGCA TTCTGCTCGG TTTGACGGTG
GCCAGCGGCC TGCTGCTCAA CCTTGCGGTC AGCGAGCGCC TGCGGCGGAT GAGCGAAGAG
CGCTTCAGCG CCAGCCGCGC ACTGGCGGCC AGTGATGCCG AAATCAATGC CAAGGCCGAG
TTCCTGGCCA AGATCAGCCA TGAAATTCGC ACACCCATGA ACGGCGTGCT GGGCATGACC
GAACTGCTGC TGGGCACGCC GCTGTCGGTC AAGCAGCGTG ACTACGTGCA GACCATCCAC
AGCGCCGGCA ACGAACTGCT CACACTGATC AACGAGATTC TCGACATTTC CAAGCTCGAG
TCGCGGCAGA TCGAACTGGA CGATGTGCAA TTCGACCTCA ATGCCCTGAT CGAAGATTGC
CTGAATATCT TCCGCGCCAA GGCCGAACAA CAGAACATCG AGCTGATCAG CTTCACCCAG
CCGCAAGTGC CACGGGTCAT TAGCGGTGAC CCTACGCGCC TGCGCCAGGC TCTCTCCAGC
CTGCTGGAAA ACGCCCTGAA AAACACCGAC CAGGGCGAAA TCCTCCTGGT CGTTGCACTG
GACCAGCGCG GCGAGGTGCC GCGCCTGCGT ATCGCCGTGC AGGACAGCGG CGAGCCGCTG
CCTGCGGCCG AGCGCGAAGC CCTGCTGCAG GCAGAGCTGC ACAGCCATCA CTTCCTTTCC
AGCAACAAGC TTGGCGGCCA CCTTGGGCTG ATCATCGCCA AGCAGCTGAT CGGCCTTATG
CAAGGCGAAT TCGGCATCAA GAGCAGCACC AGCATGGGCA ACACCCTGTG GCTGACCCTG
CCGCTCGACC CCTCTCGCCT GGAGCAACCC TTGGCCGACC TCGACAGCCC ATTGCGCGAC
GCCCGGGTGC TGGTGGTGGA CGACAACGAC ACCTGTCGCA AGGTGCTGGT GCAGCAGTGC
AGCGCCTGGG GCATGAACGT GAGTGCCGTA CCCTCGGGCA AGGAGGCCCT GGCCCTGCTA
CGGACCAAGG CGCACCTGCG TGACTATTTC GATGCGGTCT TGCTGGACCA GAACATGCCG
GGCATGACCG GCATGCAACT GGCGGCCAAG ATCAAGGAAG ACCCAAGCCT GAACCACGAC
ATCCTCGTGG TGATGCTCAC CGGTATCAGC AACGCACCGA GCAAGGTCAT TGCCCGCAAT
GCCGGGGTCA AGCGCATCCT GGCCAAACCG GTGGCCGGCT ACACGCTCAA GACCACCCTG
GCCGAAGAGC TGGCCCAGCG CGGCCGCGAA CAAACCGTGC CGATGCCCTT GCCAGGCACA
CCGCCCACCC ACGAGCTGCC GGGCGACTTT CGCGTGCTGG TCGCCGAGGA CAACAGCATC
TCGACCAAGG TGATCCGCGG CATGCTGGGC AAACTCAACC TCGAACCGGA CACCGCCAGC
AATGGCGAGG AAGCCCTGCA AGCCATGAAG GCCCAGCGTT ATGACCTGGT GCTGATGGAT
TGTGAAATGC CGGTGCTGGA CGGCTTCTCT GCCACCCAGC AACTGCGTGC CTGGGAAGTC
GCCAACCAGC GCCAGCGCAC CCCGGTGGTG GCACTGACCG CGCACATCCT GGCCGAACAC
AAAGAGCGCG CGCGGCTGGC CGGCATGGAT GGGCACATGG CCAAGCCGGT GGAGCTGTCG
CAATTGCGCG AGTTGATCCA GTATTGGGCA AACCAGCGGG AAGCCAAGAC CGATCCGCTG
CATACTTCGT AG
 
Protein sequence
MRRLRIATAL IVSLLTLLCL LPASADQGGG WSVLLDVQAN LQLSDVRSDR YRNQFSPTTL 
SDLDAAPSQQ ALWLHYRLEP GDQEQLLRVF APDLSRLDLY ALDGDRLLRQ LHHGRQAGNA
SPTLRGSDHV LPLPNSPKAV DIYLRLVSEH QLRPAISLEP AAVAASNHGQ PLLFGMLFGG
LVMLILHNLI RFLYTRSSTT LILALYHGLM LLSGLILLNL SGPWWHLWHS AQTPAAYLTL
VLAGLAGLYF TQHFFSRCSS PQLNRLLQGE MLVAGVSGLI LLFVDTLPLN LMTYALLALG
SVSMLLVSSY HWYKGYAPAR LFSLAMVVFN LGGLVLLPAL LGLTRTSTPW LLCILLGLTV
ASGLLLNLAV SERLRRMSEE RFSASRALAA SDAEINAKAE FLAKISHEIR TPMNGVLGMT
ELLLGTPLSV KQRDYVQTIH SAGNELLTLI NEILDISKLE SRQIELDDVQ FDLNALIEDC
LNIFRAKAEQ QNIELISFTQ PQVPRVISGD PTRLRQALSS LLENALKNTD QGEILLVVAL
DQRGEVPRLR IAVQDSGEPL PAAEREALLQ AELHSHHFLS SNKLGGHLGL IIAKQLIGLM
QGEFGIKSST SMGNTLWLTL PLDPSRLEQP LADLDSPLRD ARVLVVDDND TCRKVLVQQC
SAWGMNVSAV PSGKEALALL RTKAHLRDYF DAVLLDQNMP GMTGMQLAAK IKEDPSLNHD
ILVVMLTGIS NAPSKVIARN AGVKRILAKP VAGYTLKTTL AEELAQRGRE QTVPMPLPGT
PPTHELPGDF RVLVAEDNSI STKVIRGMLG KLNLEPDTAS NGEEALQAMK AQRYDLVLMD
CEMPVLDGFS ATQQLRAWEV ANQRQRTPVV ALTAHILAEH KERARLAGMD GHMAKPVELS
QLRELIQYWA NQREAKTDPL HTS