Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4614 |
Symbol | |
ID | 6113595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5098425 |
End bp | 5101196 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641624420 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001751463 |
Protein GI | 170723775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.863482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.296425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCGGC TTCGGATTGC CACAGCTCTG ATCGTCAGCT TGCTGACCCT GCTCTGCCTG CTCCCGGCTT CGGCCGACCA AGGCGGAGGC TGGTCCGTTT TGCTCGACGT ACAAGCCAAC CTGCAATTGA GCGACGTCCG CTCGGATCGC TATCGCAACC AGTTCAGCCC TACTACCCTG AGCGACCTAG ATGCCGCGCC GTCGCAACAG GCCCTGTGGC TACACTATCG CCTCGAACCA GGTGACCAGG AGCAACTGCT GCGGGTCTTT GCCCCGGACC TTTCGCGTCT GGACCTCTAC GCCCTCGACG GAGACAGGCT GCTACGCCAG CTGCACCACG GGCGCCAGGC CGGCAACGCC AGCCCGACCC TGCGCGGCAG CGATCACGTT TTGCCCTTGC CAAACAGCCC GAAAGCGGTG GACATCTACC TGCGCCTGGT TTCCGAGCAT CAACTGCGCC CGGCCATCAG CCTGGAGCCT GCGGCAGTCG CCGCTTCAAA CCATGGCCAG CCGTTGCTGT TCGGCATGCT CTTCGGCGGC CTGGTCATGC TCATCCTGCA CAACCTGATC CGCTTTCTGT ACACCCGCTC CAGCACCACC CTGATCCTTG CGCTGTACCA CGGGCTGATG CTGCTCAGCG GCCTGATCCT GCTCAACCTC AGCGGCCCCT GGTGGCACCT GTGGCACAGT GCGCAAACCC CGGCCGCCTA TCTGACCCTG GTGCTGGCGG GCCTCGCGGG GCTCTATTTC ACCCAGCACT TCTTCTCGCG CTGCAGTTCC CCGCAGCTCA ATCGCTTGTT GCAAGGCGAA ATGCTGGTGG CCGGAGTCAG CGGCCTGATC CTGCTGTTCG TGGATACCCT TCCACTCAAC CTGATGACCT ACGCCCTGCT GGCCCTGGGC AGTGTGAGCA TGCTGCTGGT CAGCAGCTAC CACTGGTACA AAGGTTATGC GCCGGCACGC CTGTTCAGCC TGGCCATGGT GGTGTTCAAC CTGGGCGGGC TGGTGCTGCT GCCGGCCCTG CTCGGTCTGA CCCGCACCTC GACGCCTTGG CTGCTGTGCA TTCTGCTCGG TTTGACGGTG GCCAGCGGCC TGCTGCTCAA CCTTGCGGTC AGCGAGCGCC TGCGGCGGAT GAGCGAAGAG CGCTTCAGCG CCAGCCGCGC ACTGGCGGCC AGTGATGCCG AAATCAATGC CAAGGCCGAG TTCCTGGCCA AGATCAGCCA TGAAATTCGC ACACCCATGA ACGGCGTGCT GGGCATGACC GAACTGCTGC TGGGCACGCC GCTGTCGGTC AAGCAGCGTG ACTACGTGCA GACCATCCAC AGCGCCGGCA ACGAACTGCT CACACTGATC AACGAGATTC TCGACATTTC CAAGCTCGAG TCGCGGCAGA TCGAACTGGA CGATGTGCAA TTCGACCTCA ATGCCCTGAT CGAAGATTGC CTGAATATCT TCCGCGCCAA GGCCGAACAA CAGAACATCG AGCTGATCAG CTTCACCCAG CCGCAAGTGC CACGGGTCAT TAGCGGTGAC CCTACGCGCC TGCGCCAGGC TCTCTCCAGC CTGCTGGAAA ACGCCCTGAA AAACACCGAC CAGGGCGAAA TCCTCCTGGT CGTTGCACTG GACCAGCGCG GCGAGGTGCC GCGCCTGCGT ATCGCCGTGC AGGACAGCGG CGAGCCGCTG CCTGCGGCCG AGCGCGAAGC CCTGCTGCAG GCAGAGCTGC ACAGCCATCA CTTCCTTTCC AGCAACAAGC TTGGCGGCCA CCTTGGGCTG ATCATCGCCA AGCAGCTGAT CGGCCTTATG CAAGGCGAAT TCGGCATCAA GAGCAGCACC AGCATGGGCA ACACCCTGTG GCTGACCCTG CCGCTCGACC CCTCTCGCCT GGAGCAACCC TTGGCCGACC TCGACAGCCC ATTGCGCGAC GCCCGGGTGC TGGTGGTGGA CGACAACGAC ACCTGTCGCA AGGTGCTGGT GCAGCAGTGC AGCGCCTGGG GCATGAACGT GAGTGCCGTA CCCTCGGGCA AGGAGGCCCT GGCCCTGCTA CGGACCAAGG CGCACCTGCG TGACTATTTC GATGCGGTCT TGCTGGACCA GAACATGCCG GGCATGACCG GCATGCAACT GGCGGCCAAG ATCAAGGAAG ACCCAAGCCT GAACCACGAC ATCCTCGTGG TGATGCTCAC CGGTATCAGC AACGCACCGA GCAAGGTCAT TGCCCGCAAT GCCGGGGTCA AGCGCATCCT GGCCAAACCG GTGGCCGGCT ACACGCTCAA GACCACCCTG GCCGAAGAGC TGGCCCAGCG CGGCCGCGAA CAAACCGTGC CGATGCCCTT GCCAGGCACA CCGCCCACCC ACGAGCTGCC GGGCGACTTT CGCGTGCTGG TCGCCGAGGA CAACAGCATC TCGACCAAGG TGATCCGCGG CATGCTGGGC AAACTCAACC TCGAACCGGA CACCGCCAGC AATGGCGAGG AAGCCCTGCA AGCCATGAAG GCCCAGCGTT ATGACCTGGT GCTGATGGAT TGTGAAATGC CGGTGCTGGA CGGCTTCTCT GCCACCCAGC AACTGCGTGC CTGGGAAGTC GCCAACCAGC GCCAGCGCAC CCCGGTGGTG GCACTGACCG CGCACATCCT GGCCGAACAC AAAGAGCGCG CGCGGCTGGC CGGCATGGAT GGGCACATGG CCAAGCCGGT GGAGCTGTCG CAATTGCGCG AGTTGATCCA GTATTGGGCA AACCAGCGGG AAGCCAAGAC CGATCCGCTG CATACTTCGT AG
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Protein sequence | MRRLRIATAL IVSLLTLLCL LPASADQGGG WSVLLDVQAN LQLSDVRSDR YRNQFSPTTL SDLDAAPSQQ ALWLHYRLEP GDQEQLLRVF APDLSRLDLY ALDGDRLLRQ LHHGRQAGNA SPTLRGSDHV LPLPNSPKAV DIYLRLVSEH QLRPAISLEP AAVAASNHGQ PLLFGMLFGG LVMLILHNLI RFLYTRSSTT LILALYHGLM LLSGLILLNL SGPWWHLWHS AQTPAAYLTL VLAGLAGLYF TQHFFSRCSS PQLNRLLQGE MLVAGVSGLI LLFVDTLPLN LMTYALLALG SVSMLLVSSY HWYKGYAPAR LFSLAMVVFN LGGLVLLPAL LGLTRTSTPW LLCILLGLTV ASGLLLNLAV SERLRRMSEE RFSASRALAA SDAEINAKAE FLAKISHEIR TPMNGVLGMT ELLLGTPLSV KQRDYVQTIH SAGNELLTLI NEILDISKLE SRQIELDDVQ FDLNALIEDC LNIFRAKAEQ QNIELISFTQ PQVPRVISGD PTRLRQALSS LLENALKNTD QGEILLVVAL DQRGEVPRLR IAVQDSGEPL PAAEREALLQ AELHSHHFLS SNKLGGHLGL IIAKQLIGLM QGEFGIKSST SMGNTLWLTL PLDPSRLEQP LADLDSPLRD ARVLVVDDND TCRKVLVQQC SAWGMNVSAV PSGKEALALL RTKAHLRDYF DAVLLDQNMP GMTGMQLAAK IKEDPSLNHD ILVVMLTGIS NAPSKVIARN AGVKRILAKP VAGYTLKTTL AEELAQRGRE QTVPMPLPGT PPTHELPGDF RVLVAEDNSI STKVIRGMLG KLNLEPDTAS NGEEALQAMK AQRYDLVLMD CEMPVLDGFS ATQQLRAWEV ANQRQRTPVV ALTAHILAEH KERARLAGMD GHMAKPVELS QLRELIQYWA NQREAKTDPL HTS
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