Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_4605 |
Symbol | |
ID | 6113586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5088661 |
End bp | 5089113 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641624411 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_001751454 |
Protein GI | 170723766 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0757] 3-dehydroquinate dehydratase II |
TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.853087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.13474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACGC TACTGGTGCT TCACGGCCCC AACCTGAACA TGCTCGGGCT CCGCGAACCG GGCCACTACG GCGCCGTGAC CCTGGCCCAG ATCAACCAGG ACCTGGAGCA GCGCGCCCGC GCCGCAGGTC ATCATCTGCA GTACCTGCAG AGCAATGCCG AGTACGAGCT GATCGACCGT ATTCACGCCG CGCGCAACGA GGGTGTGGAC TTCATCCTGA TTAATCCGGC TGCTTTCACC CACACAAGCG TCGCATTACG TGACGCATTG CTTTCGGTGA GCATCCCATT CATCGAAGTG CACCTGTCCA ACGTGCACAA ACGCGAACCG TTCCGTCACC ACTCCTACTT CTCCGATGTA GCCGTAGGGG TGATCTGCGG TCTGGGCGCC AGCGGGTATC GCCTGGCCCT GGAGGCCGCA CTGGAACAAC TGGCTGCCAA CGCACAGCCC TGA
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Protein sequence | MATLLVLHGP NLNMLGLREP GHYGAVTLAQ INQDLEQRAR AAGHHLQYLQ SNAEYELIDR IHAARNEGVD FILINPAAFT HTSVALRDAL LSVSIPFIEV HLSNVHKREP FRHHSYFSDV AVGVICGLGA SGYRLALEAA LEQLAANAQP
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