Gene PputW619_4605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_4605 
Symbol 
ID6113586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5088661 
End bp5089113 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content62% 
IMG OID641624411 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001751454 
Protein GI170723766 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.853087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.13474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC TACTGGTGCT TCACGGCCCC AACCTGAACA TGCTCGGGCT CCGCGAACCG 
GGCCACTACG GCGCCGTGAC CCTGGCCCAG ATCAACCAGG ACCTGGAGCA GCGCGCCCGC
GCCGCAGGTC ATCATCTGCA GTACCTGCAG AGCAATGCCG AGTACGAGCT GATCGACCGT
ATTCACGCCG CGCGCAACGA GGGTGTGGAC TTCATCCTGA TTAATCCGGC TGCTTTCACC
CACACAAGCG TCGCATTACG TGACGCATTG CTTTCGGTGA GCATCCCATT CATCGAAGTG
CACCTGTCCA ACGTGCACAA ACGCGAACCG TTCCGTCACC ACTCCTACTT CTCCGATGTA
GCCGTAGGGG TGATCTGCGG TCTGGGCGCC AGCGGGTATC GCCTGGCCCT GGAGGCCGCA
CTGGAACAAC TGGCTGCCAA CGCACAGCCC TGA
 
Protein sequence
MATLLVLHGP NLNMLGLREP GHYGAVTLAQ INQDLEQRAR AAGHHLQYLQ SNAEYELIDR 
IHAARNEGVD FILINPAAFT HTSVALRDAL LSVSIPFIEV HLSNVHKREP FRHHSYFSDV
AVGVICGLGA SGYRLALEAA LEQLAANAQP