| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4600 |
|---|
| Symbol | |
|---|
| ID | 6113581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5081316 |
|---|
| End bp | 5081852 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641624406 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001751449 |
|---|
| Protein GI | 170723761 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1443] Isopentenyldiphosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0447936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATAA GCCCTAACGA GGCCGCCCAC CGGGCGGCTT CCGACCGCGA ACTGGTCGCC
TGGGTGGACG AAGCCGACCA GGTGCTTGGA GCGCTGCCCA GGGCTGAGCT TCGCGGGCGT
GGTCTGATTG GCCGTTGTAC CTTCATTCTG CTGTTCAATG GCGCCGGTGA GCTGTGCGTA
CACCGGCGTA CTTTGAGCAA GGCGCTGTAT CCGGGCTATT GGGATGTGGC CGCAGGCGGC
ATGGTGGCGG CGGGGGAGGC GTATGCCGAC TCGGCGGCCC GTGAGCTGGC CGAGGAGTTG
GGCATCGAGG GCGCCGAGTT GCGTTTCCAC GAACGGTTCT ACTTCGACCA GCCCGACAAC
CGGTTGTGGT GCGCGGTGTA TTCGGCTGTG TCGGACGCGC CTCTGCGGTT GCAGCCTGAA
GAGGTGAGCG AGGCGAGGTT CATCAGCCTC GCCCAAGCTG AGGCAGAAAG CCTCAGCAAG
CCCTACTGTC CGGACTCGCT GGCGGCGCTG CAGCGGTACA AGGTCAGTCT TGGCTAA
|
|---|
| Protein sequence | MAISPNEAAH RAASDRELVA WVDEADQVLG ALPRAELRGR GLIGRCTFIL LFNGAGELCV
HRRTLSKALY PGYWDVAAGG MVAAGEAYAD SAARELAEEL GIEGAELRFH ERFYFDQPDN
RLWCAVYSAV SDAPLRLQPE EVSEARFISL AQAEAESLSK PYCPDSLAAL QRYKVSLG
|
|---|
| |